从韩国泡菜中分离出的纤维素分解菌株克雷伯氏菌属CTHL.F3a的全基因组序列
Complete Genome Sequence of Klebsiella sp. CTHL.F3a, a Cellulolytic Strain Isolated from Korean Kimchi.
作者信息
Lee C T H, Lai G K K, Griffin S D J, Leung F C C
机构信息
Shuyuan Molecular Biology Laboratory, The Independent Schools Foundation Academy, Hong Kong SAR, China.
出版信息
Microbiol Resour Announc. 2022 Aug 18;11(8):e0037722. doi: 10.1128/mra.00377-22. Epub 2022 Jul 11.
Abstract
The cellulolytic strain Klebsiella sp. CTHL.F3a was isolated from kimchi (Korean fermented cabbage/vegetables). Its complete genome sequence (6,146,223 bp, GC content of 55.21%), comprising a chromosome and a single plasmid, was established through hybrid assembly.
摘要
纤维素分解菌株肺炎克雷伯菌CTHL.F3a是从泡菜（韩国发酵白菜/蔬菜）中分离出来的。通过混合组装确定了其完整的基因组序列（6,146,223 bp，GC含量为55.21%），该序列由一条染色体和一个单一质粒组成。
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Clin Microbiol Rev. 2022 Jan 19;35(1):e0000621. doi: 10.1128/CMR.00006-21. Epub 2021 Dec 1.
2
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Microorganisms. 2021 Aug 11;9(8):1714. doi: 10.3390/microorganisms9081714.
3
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6
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