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(希克尔)德·劳布(罗汉松科)的完整叶绿体基因组。

The complete chloroplast genome of (Hickel) de Laub. (Podocarpaceae).

作者信息

Yang Xuelian, Yan Li, Wang Xia, Wu Yongfei, Hu Xiaojing, Tian Shanjun

机构信息

College of Agricultural, Guizhou University, Guiyang City, Guizhou Province, China.

出版信息

Mitochondrial DNA B Resour. 2022 Jul 18;7(7):1294-1295. doi: 10.1080/23802359.2022.2093668. eCollection 2022.

DOI:10.1080/23802359.2022.2093668
PMID:35874279
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9297713/
Abstract

(Hickel) de Laub. 1987 belongs to the genus in the family Podocarpaceae and is distributed throughout southeast Asia, including China, Vietnam, and Cambodia. It is a plant with high economic beneficial for food and construction industries. Here, we report on the complete chloroplast (cp) genome of for the first time. The complete cp genome is similar to many gymnosperm plants, however, it lacks inverted repeat regions and does not possess a typical quadripartite structure. The complete cp genome is 133,870 bp in size and the overall guanine-cytosine (GC) content was found to be 37.27%. The total number of genes is 119, including 82 protein-coding genes, 33 tRNA genes, and 4 rRNA genes. Of these, 14 genes contain one intron, two genes contain two introns, and rps12 possessed a trans-splicing mechanism. Finally, the phylogenic tree demonstrated that is closely related to (AB830885.1 and LC572156.1).

摘要

(希克尔)德·劳布。1987年属于罗汉松科的一个属,分布于东南亚各地,包括中国、越南和柬埔寨。它是一种对食品和建筑行业具有很高经济价值的植物。在此,我们首次报道了[植物名称]的完整叶绿体(cp)基因组。完整的cp基因组与许多裸子植物相似,然而,它缺乏反向重复区域,不具有典型的四分体结构。完整的cp基因组大小为133,870 bp,发现鸟嘌呤-胞嘧啶(GC)的总体含量为37.27%。基因总数为119个,包括82个蛋白质编码基因、33个tRNA基因和4个rRNA基因。其中,14个基因含有一个内含子,2个基因含有两个内含子,rps12具有反式剪接机制。最后,系统发育树表明[植物名称]与[相关植物名称](AB830885.1和LC572156.1)密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e2d4/9297713/baf7a18ee2a5/TMDN_A_2093668_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e2d4/9297713/baf7a18ee2a5/TMDN_A_2093668_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e2d4/9297713/baf7a18ee2a5/TMDN_A_2093668_F0001_B.jpg

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本文引用的文献

1
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes.PGA:一个用于叶绿体基因组快速、准确且灵活批量注释的软件包。
Plant Methods. 2019 May 21;15:50. doi: 10.1186/s13007-019-0435-7. eCollection 2019.
2
ModelFinder: fast model selection for accurate phylogenetic estimates.ModelFinder:用于准确系统发育估计的快速模型选择
Nat Methods. 2017 Jun;14(6):587-589. doi: 10.1038/nmeth.4285. Epub 2017 May 8.
3
The complete chloroplast genome sequence of the relict woody plant Metasequoia glyptostroboides Hu et Cheng.
孑遗木本植物水杉(Metasequoia glyptostroboides Hu et Cheng)的叶绿体基因组全序列
Front Plant Sci. 2015 Jun 16;6:447. doi: 10.3389/fpls.2015.00447. eCollection 2015.
4
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
5
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
6
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
7
NGS QC Toolkit: a toolkit for quality control of next generation sequencing data.NGS QC 工具包:下一代测序数据质量控制工具包。
PLoS One. 2012;7(2):e30619. doi: 10.1371/journal.pone.0030619. Epub 2012 Feb 1.
8
Comparative chloroplast genomics reveals the evolution of Pinaceae genera and subfamilies.比较叶绿体基因组学揭示了松科属和亚科的进化。
Genome Biol Evol. 2010;2:504-17. doi: 10.1093/gbe/evq036. Epub 2010 Jul 2.