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黄素酶葡萄糖氧化酶中卤化物结合的光化学与分子动力学研究

Photochemical and Molecular Dynamics Studies of Halide Binding in Flavoenzyme Glucose Oxidase.

作者信息

Zhuang Bo, Vos Marten H, Aleksandrov Alexey

机构信息

LOB, CNRS, INSERM, École Polytechnique, Institut Polytechnique de Paris, 91128, Palaiseau, France.

出版信息

Chembiochem. 2022 Oct 6;23(19):e202200227. doi: 10.1002/cbic.202200227. Epub 2022 Aug 23.

Abstract

Glucose oxidase (GOX), a characteristic flavoprotein oxidase with widespread industrial applications, binds fluoride (F ) and chloride (Cl ). We investigated binding properties of halide inhibitors of GOX through time-resolved spectral characterization of flavin-related photochemical processes and molecular dynamic simulations. Cl and F bind differently to the protein active site and have substantial but opposite effects on the population and decay of the flavin excited state. Cl binds closer to the flavin, whose excited-state decays in <100 fs due to anion-π interactions. Such interactions appear absent in F binding, which, however, significantly increases the active-site rigidity leading to more homogeneous, picosecond fluorescence decay kinetics. These findings are discussed in relation to the mechanism of halide inhibition of GOX by occupying the accommodation site of catalytic intermediates and increasing the active-site rigidity.

摘要

葡萄糖氧化酶(GOX)是一种具有广泛工业应用的典型黄素蛋白氧化酶,它能结合氟离子(F⁻)和氯离子(Cl⁻)。我们通过黄素相关光化学过程的时间分辨光谱表征和分子动力学模拟研究了GOX卤化物抑制剂的结合特性。Cl⁻和F⁻与蛋白质活性位点的结合方式不同,对黄素激发态的数量和衰减有显著但相反的影响。Cl⁻与黄素结合得更近,由于阴离子-π相互作用,其激发态在<100飞秒内衰减。F⁻结合中似乎不存在这种相互作用,然而,它会显著增加活性位点的刚性,导致更均匀的皮秒荧光衰减动力学。结合卤化物通过占据催化中间体的容纳位点和增加活性位点刚性来抑制GOX的机制对这些发现进行了讨论。

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