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木豆基因库中谷物营养成分的变异性及其在促进旱地生态系统营养安全方面的潜力。

Grain Nutrients Variability in Pigeonpea Genebank Collection and Its Potential for Promoting Nutritional Security in Dryland Ecologies.

作者信息

Susmitha Dhanapal, Kalaimagal Thiyagarajan, Senthil Ramachandran, Vetriventhan Mani, Manonmani Swaminathan, Jeyakumar Prabhakaran, Anita Bellie, Reddymalla Surender, Choudhari Pushpajeet L, Nimje Chetna A, Peerzada Ovais H, Arveti Venkata Narayana, Azevedo Vania C R, Singh Kuldeep

机构信息

Genebank, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India.

Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University (TNAU), Coimbatore, India.

出版信息

Front Plant Sci. 2022 Jul 11;13:934296. doi: 10.3389/fpls.2022.934296. eCollection 2022.

Abstract

Pigeonpea, a climate-resilient legume, is nutritionally rich and of great value in Asia, Africa, and Caribbean regions to alleviate malnutrition. Assessing the grain nutrient variability in genebank collections can identify potential sources for biofortification. This study aimed to assess the genetic variability for grain nutrients in a set of 600 pigeonpea germplasms conserved at the RS Paroda Genebank, ICRISAT, India. The field trials conducted during the 2019 and 2020 rainy seasons in augmented design with four checks revealed significant differences among genotypes for all the agronomic traits and grain nutrients studied. The germplasm had a wider variation for agronomic traits like days to 50% flowering (67-166 days), days to maturity (112-213 days), 100-seed weight (1.69-22.17 g), and grain yield per plant (16.54-57.93 g). A good variability was observed for grain nutrients, namely, protein (23.35-29.50%), P (0.36-0.50%), K (1.43-1.63%), Ca (1,042.36-2,099.76 mg/kg), Mg (1,311.01-1,865.65 mg/kg), Fe (29.23-40.98 mg/kg), Zn (24.14-35.68 mg/kg), Mn (8.56-14.01 mg/kg), and Cu (7.72-14.20 mg/kg). The germplasm from the Asian region varied widely for grain nutrients, and the ones from African region had high nutrient density. The significant genotype × environment interaction for most of the grain nutrients (except for P, K, and Ca) indicated the sensitivity of nutrient accumulation to the environment. Days to 50% flowering and days to maturity had significant negative correlation with most of the grain nutrients, while grain yield per plant had significant positive correlation with protein and magnesium, which can benefit simultaneous improvement of agronomic traits with grain nutrients. Clustering of germplasms based on Ward.D2 clustering algorithm revealed the co-clustering of germplasm from different regions. The identified top 10 nutrient-specific and 15 multi-nutrient dense landraces can serve as promising sources for the development of biofortified lines in a superior agronomic background with a broad genetic base to fit the drylands. Furthermore, the large phenotypic data generated in this study can serve as a raw material for conducting SNP/haplotype-based GWAS to identify genetic variants that can accelerate genetic gains in grain nutrient improvement.

摘要

木豆是一种适应气候变化的豆类,营养丰富,在亚洲、非洲和加勒比地区对于缓解营养不良具有重要价值。评估基因库收集品中的籽粒养分变异性可以识别生物强化的潜在来源。本研究旨在评估保存在印度国际半干旱热带作物研究所RS Paroda基因库的600份木豆种质资源的籽粒养分遗传变异性。在2019年和2020年雨季采用增广设计并设置4个对照进行的田间试验表明,所研究的所有农艺性状和籽粒养分在基因型间存在显著差异。该种质资源在农艺性状方面具有较广泛的变异,如50%开花天数(67 - 166天)、成熟天数(112 - 213天)、百粒重(1.69 - 22.17克)和单株籽粒产量(16.54 - 57.93克)。籽粒养分也表现出良好的变异性,即蛋白质(23.35 - 29.50%)、磷(0.36 - 0.50%)、钾(1.43 - 1.63%)、钙(1042.36 - 2099.76毫克/千克)、镁(1311.01 - 1865.65毫克/千克)、铁(29.23 - 40.98毫克/千克)、锌(24.14 - 35.68毫克/千克)、锰(8.56 - 14.01毫克/千克)和铜(7.72 - 14.20毫克/千克)。亚洲地区的种质资源在籽粒养分方面变异广泛,而非洲地区的种质资源具有较高的养分密度。大多数籽粒养分(除磷、钾和钙外)存在显著的基因型×环境互作,表明养分积累对环境敏感。50%开花天数和成熟天数与大多数籽粒养分呈显著负相关,而单株籽粒产量与蛋白质和镁呈显著正相关,这有利于农艺性状和籽粒养分的协同改良。基于Ward.D2聚类算法对种质资源进行聚类,揭示了来自不同地区的种质资源的共同聚类情况。鉴定出的前10个养分特异性和15个多养分密集型地方品种可作为在具有广泛遗传基础的优良农艺背景下开发适合旱地的生物强化品系的有前景的来源。此外,本研究产生的大量表型数据可作为进行基于单核苷酸多态性/单倍型的全基因组关联研究的原材料,以识别可加速籽粒养分改良遗传增益的遗传变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ea48/9310011/ab937e0900ce/fpls-13-934296-g001.jpg

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