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铜死亡相关风险评分预测肝细胞癌的预后并描绘肿瘤微环境。

Cuproptosis-Related Risk Score Predicts Prognosis and Characterizes the Tumor Microenvironment in Hepatocellular Carcinoma.

机构信息

Department of Oncology, The Third Xiangya Hospital of Central South University, Changsha, China.

Department of Gynecology, The Third Xiangya Hospital of Central South University, Changsha, China.

出版信息

Front Immunol. 2022 Jul 11;13:925618. doi: 10.3389/fimmu.2022.925618. eCollection 2022.

Abstract

AIMS

Cuproptosis is a recently identified form of programmed cell death; however, its role in hepatocellular carcinoma (HCC) remains unclear.

METHODS

A set of bioinformatic tools was integrated to analyze the expression and prognostic significance of ferredoxin 1 (), the key regulator of cuproptosis. A cuproptosis-related risk score (CRRS) was developed correlation analyses, least absolute shrinkage and selection operator (LASSO) Cox regression, and multivariate Cox regression. The metabolic features, mutation signatures, and immune profile of CRRS-classified HCC patients were investigated, and the role of CRRS in therapy guidance was analyzed.

RESULTS

was significantly downregulated in HCC, and its high expression was associated with longer survival time. HCC patients in the high-CRRS group showed a significantly lower overall survival (OS) and enriched in cancer-related pathways. Mutation analyses revealed that the high-CRRS HCC patients had a high mutational frequency of some tumor suppressors such as tumor protein P53 () and Breast-cancer susceptibility gene 1 (BRCA1)-associated protein 1 () and a low frequency of catenin beta 1 (). Besides, HCC patients with high CRRS showed an increase of protumor immune infiltrates and a high expression of immune checkpoints. Moreover, the area under the curve (AUC) values of CRRS in predicting the efficiency of sorafenib and the non-responsiveness to transcatheter arterial chemoembolization (TACE) in HCC patients reached 0.877 and 0.764, respectively.

SIGNIFICANCE

The cuproptosis-related signature is helpful in prognostic prediction and in guiding treatment for HCC patients.

摘要

目的

铜死亡是一种新发现的程序性细胞死亡形式,但它在肝细胞癌(HCC)中的作用尚不清楚。

方法

采用一系列生物信息学工具,分析铜死亡关键调节因子铁氧还蛋白 1()的表达和预后意义。通过相关性分析、最小绝对收缩和选择算子(LASSO)Cox 回归和多变量 Cox 回归,建立了铜死亡相关风险评分(CRRS)。分析了 CRRS 分类 HCC 患者的代谢特征、突变特征和免疫特征,并分析了 CRRS 在治疗指导中的作用。

结果

在 HCC 中显著下调,高表达与生存时间延长相关。高 CRRS 组 HCC 患者总生存期(OS)明显降低,且富集了癌症相关通路。突变分析显示,高 CRRS HCC 患者一些肿瘤抑制基因如肿瘤蛋白 P53()和乳腺癌易感性基因 1(BRCA1)相关蛋白 1()的突变频率较高,而连接蛋白 beta 1()的突变频率较低。此外,高 CRRS 的 HCC 患者具有更多的促肿瘤免疫浸润和更高的免疫检查点表达。此外,CRRS 在预测 HCC 患者索拉非尼治疗效果和经导管动脉化疗栓塞(TACE)反应性的曲线下面积(AUC)值分别达到 0.877 和 0.764。

意义

铜死亡相关特征有助于 HCC 患者的预后预测和治疗指导。

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