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分子动力学模拟揭示了醉茄内酯 A 抑制 α-葡萄糖苷酶和 α-淀粉酶的机制。

Molecular dynamics simulations reveal the inhibitory mechanism of Withanolide A against α-glucosidase and α-amylase.

机构信息

Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia, Johor, Malaysia.

Enzyme Technology and Green Synthesis Group, Faculty of Science, Universiti Teknologi Malaysia, Johor, Malaysia.

出版信息

J Biomol Struct Dyn. 2023 Aug-Sep;41(13):6203-6218. doi: 10.1080/07391102.2022.2104375. Epub 2022 Jul 29.

DOI:10.1080/07391102.2022.2104375
PMID:35904027
Abstract

Diabetes mellitus (DM) is a global chronic disease characterized by hyperglycemia and insulin resistance. The unsavory severe gastrointestinal side-effects of synthetic drugs to regulate hyperglycemia have warranted the search for alternative treatments to inhibit the carbohydrate digestive enzymes (e.g. α-amylase and α-glucosidase). Certain phytochemicals recently captured the scientific community's attention as carbohydrate digestive enzyme inhibitors due to their low toxicity and high efficacy, specifically the Withanolides-loaded extract of . That said, the present study evaluated the efficacy of Withanolide A in targeting both α-amylase and α-glucosidase in comparison to the synthetic drug Acarbose. Protein-ligand interactions, binding affinity, and stability were characterized using pharmacological profiling, high-end molecular docking, and molecular-dynamic simulation. Withanolide A inhibited the activity of α-glucosidase and α-amylase better, exhibiting good pharmacokinetic properties, absorption, and metabolism. Also, Withanolide A was minimally toxic, with higher bioavailability. Interestingly, Withanolide A bonded well to the active site of α-amylase and α-glucosidase, yielding the lowest binding free energy of -82.144 ± 10.671 kcal/mol and -102.1043 ± 11.231 kcal/mol compared to the Acarbose-enzyme complexes (-63.220 ± 13.283 kcal/mol and -82.148 ± 10.671 kcal/mol). Hence, the findings supported the therapeutic potential of Withanolide A as α-amylase and α-glucosidase inhibitor for DM treatment.Communicated by Ramaswamy H. Sarma.

摘要

糖尿病(DM)是一种全球性的慢性疾病,其特征是高血糖和胰岛素抵抗。调节高血糖的合成药物令人不快的严重胃肠道副作用,需要寻找替代疗法来抑制碳水化合物消化酶(如α-淀粉酶和α-葡萄糖苷酶)。某些植物化学物质由于其低毒性和高效性,最近引起了科学界的关注,是碳水化合物消化酶抑制剂,特别是负载 Withanolides 的 提取物。也就是说,本研究评估了 Withanolide A 靶向α-淀粉酶和α-葡萄糖苷酶的功效,与合成药物阿卡波糖进行了比较。使用药理学分析、高端分子对接和分子动力学模拟来表征蛋白质-配体相互作用、结合亲和力和稳定性。与阿卡波糖相比,Withanolide A 对α-葡萄糖苷酶和α-淀粉酶的抑制活性更好,表现出良好的药代动力学特性、吸收和代谢。此外,Withanolide A 的毒性极小,生物利用度更高。有趣的是,Withanolide A 与α-淀粉酶和α-葡萄糖苷酶的活性部位结合良好,产生的最低结合自由能分别为-82.144 ± 10.671 kcal/mol 和-102.1043 ± 11.231 kcal/mol,而阿卡波糖-酶复合物的结合自由能分别为-63.220 ± 13.283 kcal/mol 和-82.148 ± 10.671 kcal/mol。因此,这些发现支持了 Withanolide A 作为α-淀粉酶和α-葡萄糖苷酶抑制剂治疗糖尿病的治疗潜力。由 Ramaswamy H. Sarma 传达。

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