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来自中国云南的药用植物H. S. Lo,1978(防己科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of the medicinal plant H. S. Lo, 1978 (Menispermaceae) from Yunnan, China.

作者信息

Guan Qin, Feng Danping, Fan Min

机构信息

College of Pharmacy, Dali University, Dali, China.

Key Laboratory of Yunnan Provincial Higher Education, Institute for Development of Yunnan Daodi Medicinal Materials Resources, Dali, China.

出版信息

Mitochondrial DNA B Resour. 2022 Jul 29;7(7):1403-1405. doi: 10.1080/23802359.2022.2104670. eCollection 2022.

Abstract

H. S. Lo, 1978 is a medicinal plant commonly used in southwest China. This study characterized the first complete chloroplast (cp) genome sequence of this species. The complete cp was 157,738 bp in length, containing a large single-copy region (LSC) of 88,460 bp, a small single-copy region (SSC) of 19,778 bp, and a pair of inverted repeat regions (IRs) of 24,750 bp. It encoded 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of the complete genome was 36.7%. Phylogenetic analysis of complete cp sequences revealed that was clustered with from the Menispermaceae family.

摘要

H. S. Lo,1978年是中国西南部常用的药用植物。本研究对该物种的首个完整叶绿体(cp)基因组序列进行了特征分析。完整的cp长度为157,738 bp,包含一个88,460 bp的大单拷贝区域(LSC)、一个19,778 bp的小单拷贝区域(SSC)和一对24,750 bp的反向重复区域(IRs)。它编码130个基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。完整基因组的GC含量为36.7%。对完整cp序列的系统发育分析表明, 与防己科的 聚类在一起。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e4d/9341361/ecbd315a4f70/TMDN_A_2104670_F0001_C.jpg

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