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合成、肌酐与氢溴酸、3-氨基苯甲酸和 3,5-二硝基苯甲酸三种新盐形式的晶体结构测定和 Hirshfeld 表面分析。

Synthesis, crystal structure determination and Hirshfeld surface analysis of three new salt forms of creatinine with hydrobromic acid, 3-aminobenzoic acid and 3,5-dinitrobenzoic acid.

机构信息

Centre for Research and Development, PRIST Deemed to be University, Thanjavur 613 403, Tamil Nadu, India.

Department of Chemistry, Periyar Maniammai Institute of Science and Technology, Thanjavur 613 403, Tamil Nadu, India.

出版信息

Acta Crystallogr C Struct Chem. 2022 Aug 1;78(Pt 8):437-448. doi: 10.1107/S2053229622006684. Epub 2022 Jul 11.

Abstract

Creatinine, a biologically important compound, is used to analyze kidney function and kidney diseases in the human body. The salt form of creatinine is used in the formation of drug materials like anti-HIV, antifungal, antiprotozoal, antiviral and antitumour compounds. Here we report the solid-state structures of three new crystalline salts, namely, creatininium (2-amino-1-methyl-4-oxo-4,5-dihydro-1H-imidazol-3-ium) bromide, CHNO·Br, (I), creatininium 3-aminobenzoate, CHNO·CHNO, (II), and creatininium 3,5-dinitrobenzoate, CHNO·CHNO, (III). These salts have been synthesized and characterized by single-crystal X-ray diffraction and Hirshfeld surface analysis. The structural chemistry of salts (I)-(III) and their crystal packing are discussed in detail. The primary interaction between the creatinine cation and the acid anion in the three salts is N-H...Br/O hydrogen bonds. In salt (I), the creatinine cation and bromide anion are connected through a pair of N-H...Br hydrogen bonds forming R(8) and R(12) ring motifs. In salts (II) and (III), the creatinine cation interacts with the corresponding anion via a pair of N-H...O hydrogen bonds. The crystal structure is further stabilized by C-H...O and O-H...O hydrogen bonds with the ring motifs R(8), R(7) and R(6). Furthermore, the crystal structures are stabilized by π-π, C-H...π, C-O...π and N-O...π stacking interactions. The contributions made by each hydrogen bond in maintaining the crystal structure stability has been quantified by Hirshfeld surface analysis.

摘要

肌酸酐是一种重要的生物化合物,用于分析人体的肾功能和肾脏疾病。肌酸酐的盐形式用于合成抗 HIV、抗真菌、抗原生动物、抗病毒和抗肿瘤等药物。本文报道了三种新的晶体盐,即肌酸脒(2-氨基-1-甲基-4-氧代-4,5-二氢-1H-咪唑-3-鎓)溴化物,CHNO·Br,(I),肌酸脒间氨基苯甲酸盐,CHNO·CHNO,(II),和肌酸脒 3,5-二硝基苯甲酸盐,CHNO·CHNO,(III)的固态结构。这些盐通过单晶 X 射线衍射和 Hirshfeld 表面分析进行了合成和表征。详细讨论了盐(I)-(III)的结构化学及其晶体堆积。在这三种盐中,肌酸阳离子与酸阴离子的主要相互作用是 N-H...Br/O 氢键。在盐(I)中,肌酸阳离子和溴化物阴离子通过一对 N-H...Br 氢键连接,形成 R(8)和 R(12)环图案。在盐(II)和(III)中,肌酸阳离子通过一对 N-H...O 氢键与相应的阴离子相互作用。晶体结构进一步通过 C-H...O 和 O-H...O 氢键与 R(8)、R(7)和 R(6)环图案稳定。此外,晶体结构还通过 π-π、C-H...π、C-O...π 和 N-O...π 堆积相互作用得到稳定。通过 Hirshfeld 表面分析量化了每个氢键在维持晶体结构稳定性方面的贡献。

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