Li Ming-Jie, Yan Shi-Bai, Chen Gang, Li Guo-Sheng, Yang Yue, Wei Tao, He De-Shen, Yang Zhen, Cen Geng-Yu, Wang Jun, Liu Liu-Yu, Liang Zhi-Jian, Chen Li, Yin Bin-Tong, Xu Ruo-Xiang, Huang Zhi-Guang
Department of Pathology/Forensic Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Department of Neurology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Front Integr Neurosci. 2022 Jul 19;16:854540. doi: 10.3389/fnint.2022.854540. eCollection 2022.
Cyclin B2 (CCNB2) belongs to type B cell cycle family protein, which is located on chromosome 15q22, and it binds to cyclin-dependent kinases (CDKs) to regulate their activities. In this study, 103 high-throughput datasets related to all subtypes of lung cancer (LC) and cerebral ischemic stroke (CIS) with the data of CCNB2 expression were collected. The analysis of standard mean deviation (SMD) and summary receiver operating characteristic (SROC) reflecting expression status demonstrated significant up-regulation of CCNB2 in LC and CIS (Lung adenocarcinoma: SMD = 1.40, 95%CI [0.98-1.83], SROC = 0.92, 95%CI [0.89-0.94]. Lung squamous cell carcinoma: SMD = 2.56, 95%CI [1.64-3.48]. SROC = 0.97, 95%CI [0.95-0.98]. Lung small cell carcinoma: SMD = 3.01, 95%CI [2.01-4.01]. SROC = 0.98, 95%CI [0.97-0.99]. CIS: SMD = 0.29, 95%CI [0.05-0.53], SROC = 0.68, 95%CI [0.63-0.71]). Simultaneously, protein-protein interaction (PPI) analysis indicated that CCNB2 is the hub molecule of crossed high-expressed genes in CIS and LC. Through Multiscale embedded gene co-expression network analysis (MEGENA), a gene module of CIS including 76 genes was obtained and function enrichment analysis of the CCNB2 module genes implied that CCNB2 may participate in the processes in the formation of CIS and tissue damage caused by CIS, such as "cell cycle," "protein kinase activity," and "glycosphingolipid biosynthesis." Afterward, single-cell RNA-seq analysis, CCNB2 was found up-regulated on GABAergic neurons in brain organoids as well as T cells expressing proliferative molecules in LUAD. Concurrently, the expression of CCNB2 distributed similarly to TOP2A as a module marker of cell proliferation in cell cluster. These findings can help in the field of the pathogenesis of LC-related CIS and neuron repair after CIS damage.
细胞周期蛋白B2(CCNB2)属于B型细胞周期家族蛋白,定位于染色体15q22,它与细胞周期蛋白依赖性激酶(CDK)结合以调节其活性。在本研究中,收集了103个与肺癌(LC)和脑缺血性中风(CIS)所有亚型相关的高通量数据集以及CCNB2表达数据。反映表达状态的标准均数差(SMD)和汇总受试者工作特征(SROC)分析表明,CCNB2在LC和CIS中显著上调(肺腺癌:SMD = 1.40,95%CI [0.98 - 1.83],SROC = 0.92,95%CI [0.89 - 0.94];肺鳞状细胞癌:SMD = 2.56,95%CI [1.64 - 3.48],SROC = 0.97,95%CI [0.95 - 0.98];肺小细胞癌:SMD = 3.01,95%CI [2.01 - 4.01],SROC = 0.98,95%CI [0.97 - 0.99];CIS:SMD = 0.29,95%CI [0.05 - 0.53],SROC = 0.68,95%CI [0.63 - 0.71])。同时,蛋白质 - 蛋白质相互作用(PPI)分析表明,CCNB2是CIS和LC中交叉高表达基因的枢纽分子。通过多尺度嵌入基因共表达网络分析(MEGENA),获得了一个包含76个基因的CIS基因模块,对CCNB2模块基因的功能富集分析表明,CCNB2可能参与CIS的形成以及CIS引起的组织损伤过程,如“细胞周期”、“蛋白激酶活性”和“糖鞘脂生物合成”。随后,单细胞RNA测序分析发现,在脑类器官中的GABA能神经元以及肺腺癌中表达增殖分子的T细胞上CCNB2上调。同时,CCNB2的表达与作为细胞簇中细胞增殖模块标志物的TOP2A分布相似。这些发现有助于LC相关CIS的发病机制以及CIS损伤后神经元修复领域的研究。