Pekdemir Burcu, Duman Hatice, Arslan Ayşenur, Kaplan Merve, Karyelioğlu Melda, Özer Tolgahan, Kayılı Hacı Mehmet, Salih Bekir, Henrick Bethany M, Duar Rebbeca M, Karav Sercan
Department of Molecular Biology and Genetics, Canakkale Onsekiz Mart University, Canakkale, Turkey.
Department of Biomedical Engineering, Karabuk University, Karabuk, Turkey.
Front Bioeng Biotechnol. 2022 Jul 22;10:922423. doi: 10.3389/fbioe.2022.922423. eCollection 2022.
Conjugated -glycans are considered next-generation bioactive prebiotic compounds due to their selective stimulation of beneficial microbes. These compounds are glycosidically attached to proteins through -acetylglucosamines specific asparagine residue (AsN-X-Ser/Thr). Certain bacteria such as () have been shown to be capable of utilizing conjugated -glycans, owing to their specialized genomic abilities. possess a unique enzyme, Endo--acetylglucosaminidase (EndoBI-1) which cleaves all types of conjugated -glycans from glycoproteins. In this study, recombinantly cloned EndoBI-1 enzyme activity was investigated using various immobilization methods: 1) adsorption, 2) entrapment-based alginate immobilization, 3) SulfoLink-, and 4) AminoLink-based covalent bonding immobilization techniques were compared to develop the optimum application of EndoBI-1 to food processes. The yield of enzyme immobilization and the activity of each immobilized enzyme by different approaches were investigated. The -glycans released from lactoperoxidase (LPO) using different immobilized enzyme forms were characterized using MALDI-TOF mass spectrometry (MS). As expected, regardless of the techniques, the enzyme activity decreased after the immobilization methods. The enzyme activity of adsorption and entrapment-based alginate immobilization was found to be 71.55% ± 0.6 and 20.32% ± 3.18, respectively, whereas the activity of AminoLink- and SulfoLink-based covalent bonding immobilization was found to be 58.05 ± 1.98 and 47.49% ± 0.30 compared to the free form of the enzyme, respectively. However, extended incubation time recovery achieved activity similar to that of the free form. More importantly, each immobilization method resulted in the same glycan profile containing 11 different -glycan structures from a model glycoprotein LPO based on MALDI-TOF MS analysis. The glycan data analysis suggests that immobilization of EndoBI-1 is not affecting the enzyme specificity, which enables full glycan release without a limitation. Hence, different immobilization methods investigated in this study can be chosen for effective enzyme immobilization to obtain bioactive glycans. These findings highlight that further optimization of these methods can be a promising approach for future processing scale-up and commercialization of EndoBI-1 and similar enzymes.
由于其对有益微生物的选择性刺激作用,共轭聚糖被认为是下一代具有生物活性的益生元化合物。这些化合物通过特定的天冬酰胺残基(Asn-X-Ser/Thr)上的N-乙酰葡糖胺以糖苷键的形式连接到蛋白质上。某些细菌,如嗜热栖热菌(Thermus thermophilus),由于其特殊的基因组能力,已被证明能够利用共轭聚糖。嗜热栖热菌拥有一种独特的酶,内切β-N-乙酰葡糖胺酶(EndoBI-1),它能从糖蛋白上切割所有类型的共轭聚糖。在本研究中,使用多种固定化方法研究了重组克隆的EndoBI-1酶的活性:1)吸附法,2)基于包埋的海藻酸盐固定化法,3)基于SulfoLink的固定化法,4)基于AminoLink的共价键固定化技术,以开发EndoBI-1在食品加工中的最佳应用。研究了不同方法的酶固定化产率和每种固定化酶的活性。使用基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)对使用不同固定化酶形式从乳过氧化物酶(LPO)释放的聚糖进行了表征。正如预期的那样,无论采用何种技术,固定化方法后酶活性都会降低。吸附法和基于包埋的海藻酸盐固定化法的酶活性分别为71.55%±0.6和20.32%±3.18,而与游离酶形式相比,基于AminoLink和SulfoLink的共价键固定化法的活性分别为58.05±1.98和47.49%±0.30。然而,延长孵育时间后恢复的活性与游离酶形式相似。更重要的是,基于MALDI-TOF MS分析,每种固定化方法都产生了相同的聚糖谱,包含来自模型糖蛋白LPO的11种不同的聚糖结构。聚糖数据分析表明,EndoBI-1的固定化不会影响酶的特异性,这使得能够不受限制地完全释放聚糖。因此,可以选择本研究中研究的不同固定化方法进行有效的酶固定化,以获得生物活性聚糖。这些发现突出表明,进一步优化这些方法可能是未来扩大EndoBI-1和类似酶的加工规模及商业化的一种有前景的方法。