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富含甘氨酸的RNA结合辅助因子RZ1AL与番茄的成熟和发育相关。

Glycine-rich RNA-binding cofactor RZ1AL is associated with tomato ripening and development.

作者信息

Li Xindi, Yang Yongfang, Zeng Ni, Qu Guiqin, Fu Daqi, Zhu Benzhong, Luo Yunbo, Ostersetzer-Biran Oren, Zhu Hongliang

机构信息

College of Food Science & Nutritional Engineering, China Agricultural University, Beijing 100083, China.

Tsinghua-Peking Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing 100084, China.

出版信息

Hortic Res. 2022 Aug 2;9:uhac134. doi: 10.1093/hr/uhac134. eCollection 2022.

Abstract

Tomato ripening is a complex and dynamic process coordinated by many regulatory elements, including plant hormones, transcription factors, and numerous ripening-related RNAs and proteins. Although recent studies have shown that some RNA-binding proteins are involved in the regulation of the ripening process, understanding of how RNA-binding proteins affect fruit ripening is still limited. Here, we report the analysis of a glycine-rich RNA-binding protein, RZ1A-Like (RZ1AL), which plays an important role in tomato ripening, especially fruit coloring. To analyze the functions of in fruit development and ripening, we generated knockout mutant lines via the CRISPR/Cas9 gene-editing system. Knockout of reduced fruit lycopene content and weight in the mutant plants. encodes a nucleus-localized protein that is associated with Cajal-related bodies. RNA-seq data demonstrated that the expression levels of genes that encode several key enzymes associated with carotenoid biosynthesis and metabolism were notably downregulated in fruits. Proteomic analysis revealed that the levels of various ribosomal subunit proteins were reduced. This could affect the translation of ripening-related proteins such as ZDS. Collectively, our findings demonstrate that may participate in the regulation of carotenoid biosynthesis and metabolism and affect tomato development and fruit ripening.

摘要

番茄成熟是一个由许多调控元件协调的复杂动态过程,这些调控元件包括植物激素、转录因子以及众多与成熟相关的RNA和蛋白质。尽管最近的研究表明一些RNA结合蛋白参与了成熟过程的调控,但对于RNA结合蛋白如何影响果实成熟的理解仍然有限。在此,我们报道了对一种富含甘氨酸的RNA结合蛋白RZ1A-Like(RZ1AL)的分析,它在番茄成熟尤其是果实着色过程中发挥重要作用。为了分析其在果实发育和成熟中的功能,我们通过CRISPR/Cas9基因编辑系统构建了基因敲除突变体株系。在突变体植株中,RZ1AL基因的敲除降低了果实中番茄红素的含量和重量。RZ1AL编码一种定位于细胞核的、与卡哈尔相关小体有关的蛋白质。RNA测序数据表明,在RZ1AL基因敲除的果实中,编码几种与类胡萝卜素生物合成和代谢相关的关键酶的基因表达水平显著下调。蛋白质组学分析显示,各种核糖体亚基蛋白的水平降低。这可能会影响如八氢番茄红素脱氢酶(ZDS)等与成熟相关蛋白的翻译。总的来说,我们的研究结果表明,RZ1AL可能参与类胡萝卜素生物合成和代谢的调控,并影响番茄的发育和果实成熟。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2703/9350831/73f5d19bd756/uhac134f1.jpg

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