Universität Wien, Fakultät für Chemie, Institut für Biophysikalische Chemie, Josef-Holaubek-Platz 2, 1090 Wien, Austria.
Environ Sci Technol. 2022 Sep 6;56(17):11952-11968. doi: 10.1021/acs.est.2c03770. Epub 2022 Aug 9.
Over the last millennia, wetlands have been sequestering carbon from the atmosphere via photosynthesis at a higher rate than releasing it and, therefore, have globally accumulated 550 × 10 g of carbon, which is equivalent to 73% of the atmospheric carbon pool. The accumulation of organic carbon in wetlands is effectuated by phenolic compounds, which suppress the degradation of soil organic matter by inhibiting the activity of organic-matter-degrading enzymes. The enzymatic removal of phenolic compounds by bacterial tyrosinases has historically been blocked by anoxic conditions in wetland soils, resulting from waterlogging. Bacterial tyrosinases are a subgroup of oxidoreductases that oxidatively remove phenolic compounds, coupled to the reduction of molecular oxygen to water. The biochemical properties of bacterial tyrosinases have been investigated thoroughly in vitro within recent decades, while investigations focused on carbon fluxes in wetlands on a macroscopic level have remained a thriving yet separated research area so far. In the wake of climate change, however, anoxic conditions in wetland soils are threatened by reduced rainfall and prolonged summer drought. This potentially allows tyrosinase enzymes to reduce the concentration of phenolic compounds, which in turn will increase the release of stored carbon back into the atmosphere. To offer compelling evidence for the novel concept that bacterial tyrosinases are among the key enzymes influencing carbon cycling in wetland ecosystems first, bacterial organisms indigenous to wetland ecosystems that harbor a TYR gene within their respective genome () have been identified, which revealed a phylogenetically diverse community of bacteria indigenous to wetlands based on genomic sequencing data. Bacterial TYR host organisms covering seven phyla (Acidobacteria, Actinobacteria, Bacteroidetes, Firmicutes, Nitrospirae, Planctomycetes, and Proteobacteria) have been identified within various wetland ecosystems (peatlands, marshes, mangrove forests, bogs, and alkaline soda lakes) which cover a climatic continuum ranging from high arctic to tropic ecosystems. Second, it is demonstrated that (in vitro) bacterial TYR activity is commonly observed at pH values characteristic for wetland ecosystems (ranging from pH 3.5 in peatlands and freshwater swamps to pH 9.0 in soda lakes and freshwater marshes) and toward phenolic compounds naturally present within wetland environments (-coumaric acid, gallic acid, protocatechuic acid, -hydroxybenzoic acid, caffeic acid, catechin, and epicatechin). Third, analyzing the available data confirmed that bacterial host organisms tend to exhibit in vitro growth optima at pH values similar to their respective wetland habitats. Based on these findings, it is concluded that, following increased aeration of previously anoxic wetland soils due to climate change, TYRs are among the enzymes capable of reducing the concentration of phenolic compounds present within wetland ecosystems, which will potentially destabilize vast amounts of carbon stored in these ecosystems. Finally, promising approaches to mitigate the detrimental effects of increased TYR activity in wetland ecosystems and the requirement of future investigations of the abundance and activity of TYRs in an environmental setting are presented.
在过去的几千年里,湿地通过光合作用从大气中吸收碳的速度比释放碳的速度快,因此在全球范围内积累了 550×10 g 的碳,相当于大气碳库的 73%。湿地中有机碳的积累是由酚类化合物实现的,酚类化合物通过抑制有机物质降解酶的活性来抑制土壤有机物质的降解。细菌酪氨酸酶通过生化途径将酚类化合物氧化去除,同时将分子氧还原为水,从而有效地去除了土壤中的酚类化合物。在过去的几十年里,人们对细菌酪氨酸酶的生化特性进行了深入的研究,而对湿地碳通量的宏观研究仍然是一个蓬勃发展但相对独立的研究领域。然而,随着气候变化,湿地土壤中的缺氧条件受到降雨量减少和夏季干旱时间延长的威胁。这可能使酪氨酸酶能够降低酚类化合物的浓度,从而增加储存的碳重新释放回大气中的量。为了提供令人信服的证据,证明细菌酪氨酸酶是影响湿地生态系统碳循环的关键酶之一,首先,在湿地生态系统中发现了具有 TYR 基因的细菌,这些细菌在各自的基因组中(),基于基因组测序数据,揭示了一个基于湿地的细菌多样性社区。已在各种湿地生态系统(泥炭地、沼泽、红树林、沼泽和碱性苏打湖)中鉴定出覆盖七个门(酸杆菌门、放线菌门、拟杆菌门、厚壁菌门、硝化螺旋菌门、浮霉菌门和变形菌门)的细菌 TYR 宿主生物。这些湿地生态系统的气候范围从高纬度到热带生态系统。其次,证明(体外)细菌 TYR 活性通常在湿地生态系统特有的 pH 值范围内观察到(从泥炭地和淡水沼泽的 pH3.5 到苏打湖和淡水沼泽的 pH9.0),并针对湿地环境中存在的天然酚类化合物(对香豆酸、没食子酸、原儿茶酸、-羟基苯甲酸、咖啡酸、儿茶素和表儿茶素)。第三,分析现有数据证实,细菌宿主生物在与其各自湿地生境相似的 pH 值下表现出体外生长最佳。基于这些发现,可以得出结论,由于气候变化导致先前缺氧湿地土壤的通气增加,TYR 是能够降低湿地生态系统中存在的酚类化合物浓度的酶之一,这可能会使这些生态系统中储存的大量碳变得不稳定。最后,提出了减轻湿地生态系统中 TYR 活性增加的不利影响以及在环境中研究 TYRs 丰度和活性的未来需求的有前途的方法。