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脊椎动物一氧化氮合酶家族的进化及对鳃发育的新认识。

Evolution of the nitric oxide synthase family in vertebrates and novel insights in gill development.

机构信息

Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Napoli 80121, Italy.

Laboratory for Evolutionary Morphology, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe 650-0047, Japan.

出版信息

Proc Biol Sci. 2022 Aug 10;289(1980):20220667. doi: 10.1098/rspb.2022.0667.

DOI:10.1098/rspb.2022.0667
PMID:35946155
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9363997/
Abstract

Nitric oxide (NO) is an ancestral key signalling molecule essential for life and has enormous versatility in biological systems, including cardiovascular homeostasis, neurotransmission and immunity. Although our knowledge of NO synthases (Nos), the enzymes that synthesize NO , is substantial, the origin of a large and diversified repertoire of gene orthologues in fishes with respect to tetrapods remains a puzzle. The recent identification of in the ray-finned fish spotted gar, which was considered lost in this lineage, changed this perspective. This finding prompted us to explore gene evolution, surveying vertebrate species representing key evolutionary nodes. This study provides noteworthy findings: first, experienced several lineage-specific gene duplications and losses. Second, was found to be lost independently in two different teleost lineages, Elopomorpha and Clupeocephala. Third, the expression of at least one paralogue in the gills of developing shark, bichir, sturgeon, and gar, but not in lamprey, suggests that expression in this organ may have arisen in the last common ancestor of gnathostomes. These results provide a framework for continuing research on genes' roles, highlighting subfunctionalization and reciprocal loss of function that occurred in different lineages during vertebrate genome duplications.

摘要

一氧化氮(NO)是一种古老的关键信号分子,对生命至关重要,在包括心血管稳态、神经递质传递和免疫在内的生物系统中具有巨大的多功能性。尽管我们对合成 NO 的酶——一氧化氮合酶(Nos)有了相当的了解,但鱼类与四足动物相比,其大量多样化的基因直系同源物的起源仍然是一个谜。最近在射线鳍鱼类斑点叉尾鮰中发现了它,这改变了这一看法,而在该谱系中,人们曾认为它已经丢失。这一发现促使我们探索基因的进化,调查了代表关键进化节点的脊椎动物物种。这项研究提供了值得注意的发现:首先,经历了几次谱系特异性的基因重复和丢失。其次,发现它在两个不同的硬骨鱼谱系(Elopomorpha 和 Clupeocephala)中独立丢失。第三,在鲨鱼、比目鱼、鲟鱼和叉尾鮰的鳃中至少有一种 基因的一个旁系同源物的表达,但在七鳃鳗中没有,这表明在有颌类的共同祖先中,该器官中的 表达可能已经出现。这些结果为继续研究 基因的作用提供了一个框架,强调了在脊椎动物基因组加倍过程中不同谱系中发生的亚功能化和功能相互丧失。

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本文引用的文献

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Expression Pattern of in the Developing Nervous System of Ray-Finned Fish.在硬骨鱼类神经系统发育过程中 的表达模式。
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2
The bowfin genome illuminates the developmental evolution of ray-finned fishes.弓鳍鱼基因组揭示了硬骨鱼类的发育进化。
Nat Genet. 2021 Sep;53(9):1373-1384. doi: 10.1038/s41588-021-00914-y. Epub 2021 Aug 30.
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Crosstalk between nitric oxide and retinoic acid pathways is essential for amphioxus pharynx development.一氧化氮和维甲酸途径的串扰对于文昌鱼咽部发育是必需的。
Elife. 2021 Aug 25;10:e58295. doi: 10.7554/eLife.58295.
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Reconstruction of proto-vertebrate, proto-cyclostome and proto-gnathostome genomes provides new insights into early vertebrate evolution.原脊椎动物、原囊胚动物和原颌动物基因组的重建为早期脊椎动物进化提供了新的见解。
Nat Commun. 2021 Jul 23;12(1):4489. doi: 10.1038/s41467-021-24573-z.
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The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization.小眼野鲟基因组序列与节段性重复化的机制
Nat Ecol Evol. 2020 Jun;4(6):841-852. doi: 10.1038/s41559-020-1166-x. Epub 2020 Mar 30.
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A single-cell transcriptome atlas for zebrafish development.斑马鱼发育的单细胞转录组图谱。
Dev Biol. 2020 Mar 15;459(2):100-108. doi: 10.1016/j.ydbio.2019.11.008. Epub 2019 Nov 27.
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