Key Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226019, China.
Co-Innovation Center for Sustainable Forestry in Southern China, Key Laboratory of Forest Genetics & Biotechnology, Ministry of Education, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China.
Int J Mol Sci. 2022 Jul 29;23(15):8401. doi: 10.3390/ijms23158401.
Long-chain acyl-CoA synthetases (LACSs) catalyze fatty acids (FAs) to form fatty acyl-CoA thioesters, which play essential roles in FA and lipid metabolisms and cuticle wax biosynthesis. Although LACSs from Arabidopsis have been intensively studied, the characterization and function of LACSs from poplar are unexplored. Here, 10 poplar genes were identified from the poplar genome and distributed to eight chromosomes. A phylogenetic tree indicated that PtLACSs are sorted into six clades. Collinearity analysis and duplication events demonstrated that expand through segmental replication events and experience purifying selective pressure during the evolutionary process. Expression patterns revealed that have divergent expression changes in response to abiotic stress. Interaction proteins and GO analysis could enhance the understanding of putative interactions among protein and gene regulatory networks related to FA and lipid metabolisms. Cluster networks and long-chain FA (LCFA) and very long-chain FA (VLCFA) content analysis revealed the possible regulatory mechanism in response to drought and salt stresses in poplar. The present study provides valuable information for the functional identification of PtLACSs in response to abiotic stress metabolism in poplar.
长链酰基辅酶 A 合成酶 (LACSs) 催化脂肪酸 (FAs) 形成脂肪酸酰基辅酶 A 硫酯,在 FA 和脂质代谢以及角质层蜡生物合成中发挥重要作用。尽管拟南芥的 LACSs 已经得到了深入研究,但杨树的 LACSs 的特征和功能尚未得到探索。在这里,从杨树基因组中鉴定了 10 个杨树基因,并分布在 8 条染色体上。系统发育树表明 PtLACSs 分为六个分支。共线性分析和复制事件表明 通过片段复制事件扩张,并在进化过程中经历纯化选择压力。表达模式表明 对非生物胁迫有不同的表达变化。互作蛋白和 GO 分析可以增强对 FA 和脂质代谢相关蛋白和基因调控网络之间可能相互作用的理解。聚类网络和长链 FA(LCFA)和超长链 FA(VLCFA)含量分析揭示了杨树响应干旱和盐胁迫的可能调控机制。本研究为杨树响应非生物胁迫代谢中 PtLACSs 的功能鉴定提供了有价值的信息。