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当场抓获:髓过氧化物酶-铜蓝蛋白-α-凝血酶复合物的建模和确证。

Caught red handed: modeling and confirmation of the myeloperoxidase ceruloplasmin alpha-thrombin complex.

机构信息

Smorodintsev Research Institute of Influenza, Russian Ministry of Health, 15/17 Ulitsa Prof. Popova, St. Petersburg, Russia, 197376.

Peter the Great Saint Petersburg Polytechnic University, 29 Ulitsa Polytechnicheskaya, St. Petersburg, Russia, 194064.

出版信息

Biometals. 2022 Dec;35(6):1157-1168. doi: 10.1007/s10534-022-00432-2. Epub 2022 Aug 13.

DOI:10.1007/s10534-022-00432-2
PMID:35962914
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9375587/
Abstract

The work is devoted to the study of the structural characteristics of the myeloperoxidase-ceruloplasmin-thrombin complex using small-angle neutron scattering methods in combination with computer modeling, as well as surface plasmon resonance and solid-phase enzyme assay. We have previously shown that the functioning of active myeloperoxidase during inflammation, despite the presence in the blood of an excess of ceruloplasmin which inhibits its activity, is possible due to the partial proteolysis of ceruloplasmin by thrombin. In this study, the myeloperoxidase-ceruloplasmin-thrombin heterohexamer was obtained in vitro. The building of a heterohexamer full-atomic model in silico, considering the glycosylation of the constituent proteins, confirmed the absence of steric barriers for the formation of protein-protein contacts. It was shown that the partial proteolysis of ceruloplasmin does not affect its ability to bind to myeloperoxidase, and a structural model of the heterohexamer was obtained using the small-angle neutron scattering method.

摘要

这项工作致力于使用小角中子散射方法结合计算机建模,以及表面等离子体共振和固相酶测定法,研究髓过氧化物酶-铜蓝蛋白-凝血酶复合物的结构特征。我们之前已经表明,尽管血液中存在过量的抑制其活性的铜蓝蛋白,但在炎症期间活性髓过氧化物酶的功能是可能的,这是由于凝血酶对铜蓝蛋白的部分蛋白水解。在这项研究中,体外获得了髓过氧化物酶-铜蓝蛋白-凝血酶异六聚体。在考虑到组成蛋白质的糖基化的情况下,在计算机上构建异六聚体全原子模型,证实了形成蛋白质-蛋白质接触不存在空间位阻。结果表明,铜蓝蛋白的部分蛋白水解并不影响其与髓过氧化物酶结合的能力,并且使用小角中子散射方法获得了异六聚体的结构模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/3d1863f76cfe/10534_2022_432_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/e327d5a391d4/10534_2022_432_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/152592b817b5/10534_2022_432_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/c0c9636766ad/10534_2022_432_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/f2ef0a12ea2d/10534_2022_432_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/3d1863f76cfe/10534_2022_432_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/e327d5a391d4/10534_2022_432_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/152592b817b5/10534_2022_432_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/c0c9636766ad/10534_2022_432_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/f2ef0a12ea2d/10534_2022_432_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b5d/9375587/3d1863f76cfe/10534_2022_432_Fig5_HTML.jpg

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Patients with COVID-19: in the dark-NETs of neutrophils.COVID-19 患者:中性粒细胞的黑暗网络。
Cell Death Differ. 2021 Nov;28(11):3125-3139. doi: 10.1038/s41418-021-00805-z. Epub 2021 May 24.
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The Enzymatic and Non-Enzymatic Function of Myeloperoxidase (MPO) in Inflammatory Communication.
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Antioxidants (Basel). 2021 Apr 5;10(4):562. doi: 10.3390/antiox10040562.
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Hyper-truncated Asn355- and Asn391-glycans modulate the activity of neutrophil granule myeloperoxidase.超截断的 Asn355- 和 Asn391-聚糖调节中性粒细胞颗粒髓过氧化物酶的活性。
J Biol Chem. 2021 Jan-Jun;296:100144. doi: 10.1074/jbc.RA120.016342. Epub 2020 Dec 10.
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