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m6A 相关代谢分子分类与软组织肉瘤预后和免疫治疗反应的相关性。

m6A-related metabolism molecular classification with distinct prognosis and immunotherapy response in soft tissue sarcoma.

机构信息

Department of Spine and Orthopedic Oncology, Zhongnan Hospital of Wuhan University, Wuhan, China.

School of Stomatology, Southern Medical University, Guangzhou, China.

出版信息

Front Immunol. 2022 Jul 28;13:895465. doi: 10.3389/fimmu.2022.895465. eCollection 2022.

Abstract

N6-methyladenosine (m6A) methylation, one of the most crucial RNA modifications, has been proven to play a key role that affect prognosis of soft tissue sarcoma (STS). However, m6A methylation potential role in STS metabolic processes remains unknown. We comprehensively estimated the m6A metabolic molecular subtypes and corresponding survival, immunity, genomic and stemness characteristics based on 568 STS samples and m6A related metabolic pathways. Then, to quantify the m6A metabolic subtypes, machine learning algorithms were used to develop the m6A-metabolic Scores of individual patients. Finally, two distinct m6A metabolic subtypes (Cluster A and Cluster B) among the STS patients were identified. Compared to Cluster B subtype, the Cluster A subtype was mainly characterized by better survival advantages, activated anti-tumor immune microenvironment, lower gene mutation frequency and higher anti-PD-1 immunotherapy response rates. We also found that the m6A-metabolic Scores could accurately predict the molecular subtype of STS, prognosis, the abundance of immune cell infiltration, tumor metastasis status, sensitivity to chemotherapeutics and immunotherapy response. In general, this study revealed that m6A-regulated tumor metabolism processes played a key role in terms of prognosis of STS, tumor progression, and immune microenvironment. The identification of metabolic molecular subtypes and the construction of m6A-metabolic Score will help to more effectively guide immunotherapy, metabolic therapy and chemotherapy in STS.

摘要

N6-甲基腺苷(m6A)甲基化是最关键的 RNA 修饰之一,已被证明在影响软组织肉瘤(STS)预后方面发挥着关键作用。然而,m6A 甲基化在 STS 代谢过程中的潜在作用尚不清楚。我们全面评估了 568 例 STS 样本和 m6A 相关代谢途径的 m6A 代谢分子亚型及其相应的生存、免疫、基因组和干性特征。然后,为了量化 m6A 代谢亚型,我们使用机器学习算法为个体患者开发了 m6A-代谢评分。最后,在 STS 患者中确定了两种不同的 m6A 代谢亚型(Cluster A 和 Cluster B)。与 Cluster B 亚型相比,Cluster A 亚型的主要特征是更好的生存优势、激活的抗肿瘤免疫微环境、更低的基因突变频率和更高的抗 PD-1 免疫治疗反应率。我们还发现,m6A-代谢评分可以准确预测 STS 的分子亚型、预后、免疫细胞浸润的丰度、肿瘤转移状态、对化疗和免疫治疗反应的敏感性。总的来说,这项研究表明,m6A 调节的肿瘤代谢过程在 STS 的预后、肿瘤进展和免疫微环境方面起着关键作用。代谢分子亚型的鉴定和 m6A-代谢评分的构建将有助于更有效地指导 STS 中的免疫治疗、代谢治疗和化疗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f8b/9374037/c307624c6117/fimmu-13-895465-g001.jpg

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