Department of Medicine Laboratory, Second People's Hospital of Lianyungang (Cancer Hospital of Lianyungang), Lianyungang, China.
Department of Laboratory Medicine, Affiliated Hospital of Jiangsu University, Zhenjiang, China.
Front Cell Infect Microbiol. 2022 Jul 28;12:953302. doi: 10.3389/fcimb.2022.953302. eCollection 2022.
is the second or third most common Candida-associated species isolated from hospital-acquired infections, surpassing even in some hospitals. With the rapid progression of the disease course of infections, there is an urgent need for a rapid and sensitive on-site assay for clinical diagnosis. Isothermal amplification is a recently developed method for rapid nucleic acid detection that is being increasingly used for on-site detection, especially recombinase polymerase amplification (RPA). RPA combined with lateral flow strips (LFS) can rapidly amplify and visually detect the target gene within 20 min. The whole detection process can be controlled within 30-60 min by rapid sample pre-treatment. In this study, RPA-LFS was used to amplify the gene of . The primer-probe design was optimized by introducing base mismatches (probe modification of one base) to obtain a highly specific and sensitive primer-probe combination for clinical sample detection. RPA-LFS was performed on 23 common clinical pathogens to determine the specificity of the assay system. The RPA-LFS system specifically detected without cross-reaction with other fungi or bacteria. Gradient dilutions of the template were tested to explore the lower limit of detection of this detection system and to determine the sensitivity of the assay. The sensitivity was 10 CFU/µL, without interference from genomic DNA of other species. The RPA-LFS and qPCR assays were performed on 227 clinical samples to evaluate the detection performance of the RPA-LFS system. Eighty-five samples were identified as , representing a detection rate of 37.5%. The results were consistent with qPCR and conventional culture methods. The collective findings indicate a reliable molecular diagnostic method for the detection of , and to meet the urgent need for rapid, specific, sensitive, and portable clinical field-testing.
是从医院获得性感染中分离出来的第二或第三常见的念珠菌相关物种,甚至在一些医院超过了。由于感染的疾病进程迅速进展,迫切需要一种快速灵敏的现场检测方法进行临床诊断。等温扩增是一种新开发的快速核酸检测方法,越来越多地用于现场检测,特别是重组酶聚合扩增(RPA)。RPA 与横向流动条(LFS)相结合,可以在 20 分钟内快速扩增并直观地检测目标基因。通过快速的样品预处理,整个检测过程可以在 30-60 分钟内得到控制。在这项研究中,RPA-LFS 用于扩增 的基因。通过引入碱基错配(探针的一个碱基修饰)来优化引物-探针设计,获得了用于临床样本检测的高度特异性和灵敏的引物-探针组合。RPA-LFS 对 23 种常见临床病原体进行了检测,以确定该检测系统的特异性。RPA-LFS 系统特异性检测 ,与其他真菌或细菌无交叉反应。测试模板的梯度稀释以探讨该检测系统的下限检测限,并确定该测定的灵敏度。灵敏度为 10 CFU/µL,不受其他物种基因组 DNA 的干扰。RPA-LFS 和 qPCR 检测在 227 个临床样本上进行,以评估 RPA-LFS 系统的检测性能。85 个样本被鉴定为 ,检出率为 37.5%。结果与 qPCR 和常规培养方法一致。综上所述,该研究提供了一种用于检测 的可靠分子诊断方法,满足了对快速、特异、灵敏和便携式临床现场检测的迫切需求。