Oladipo Elijah Kolawole, Jimah Esther Moradeyo, Irewolede Boluwatife Abayomi, Folakanmi Elizabeth Oluwatoyin, Olubodun Odunola Abimbola, Adediran Daniel Adewole, Akintibubo Samuel Adebowale, Odunlami Foluso Daniel, Olufemi Seun Elijah, Ojo Taiwo Ooreoluwa, Akinro Omodamola Paulina, Hezekiah Oluwaseun Samuel, Olayinka Adenike Titilayo, Abiala Grace Asegunloluwa, Idowu Akindele Felix, Ogunniran James Akinwunmi, Ikuomola Mary Omotoyinbo, Adegoke Hadijat Motunrayo, Idowu Usman Abiodun, Akindiya Olawumi Elizabeth, Oluwasanya Glory Jesudara, Akanbi Gideon Mayowa, Bamigboye Favour Oluwadara, Aremu Rasidat Oyindamola, Awobiyi Hezekiah Oluwajoba, Kolapo Kehinde Temitope, Oluwasegun Jerry Ayobami, Olatunde Simeon Kayowa, Adelusi Temitope Isaac
Genomics Unit, Helix Biogen Institute, Ogbomoso, Oyo State, Nigeria.
Laboratory of Molecular Biology, Bioinformatics and Immunology, Department of Microbiology, Adeleke University, Ede, Osun State, Nigeria.
J Biomol Struct Dyn. 2023 Aug-Sep;41(14):6676-6683. doi: 10.1080/07391102.2022.2111358. Epub 2022 Aug 13.
has been identified as a significant cause of urogenital disease, as well as a risk factor for bladder cancer and HIV/AIDS. The parasites are obtained trans-dermally by swimming or wading in contaminated freshwater, and they are also transmitted to humans by freshwater snails. The organisms infect the vasculature of the gastrointestinal or genitourinary tracts. Worms live in blood vessels and lay eggs that become embedded in the bladder wall, causing chronic immune-mediated disease and squamous cell carcinoma growth. The primary goal of this research is to predict and design a novel synthetic protein containing multiple immunodominant B cell epitopes using three schistosome proteins: XP-012801068.2, XP-012801892.2, and XP-012793835.2 softwares were used to analyze the proteins' primary, secondary, and tertiary structures (BepiPred, BcPred).The B cell construct was then evaluated using I-TASSER server, and physicochemical properties, as well as homology modeling of the 3 D structure of the protein, was obtained. In silico analyses revealed regions with high immunogenicity. For XP-012801068.2, three epitopes are found between residues 292-334, 3-22, and 314-333; for XP-012801892.2, three epitopes are found in the residues 184-236, 81-100, and 329-348 for XP-012793835.2, four epitopes are found in the residues 185-222, 469-512, 649-713, and 338-357. The construct's has an average length of 308 bp, instability index of 49.96, theoretical PI of 4.2 and a C score -1.59. Furthermore, these parameters analyzed reveals that the constructed multi-epitope peptide has the potential to provide a theoretical basis for the development of a diagnostic kit.Communicated by Ramaswamy H. Sarma.
已被确定为泌尿生殖系统疾病的重要病因,以及膀胱癌和艾滋病毒/艾滋病的危险因素。寄生虫通过在受污染的淡水中游泳或涉水经皮肤感染,也可通过淡水蜗牛传播给人类。这些生物体感染胃肠道或泌尿生殖道的血管。蠕虫生活在血管中并产卵,这些卵会嵌入膀胱壁,导致慢性免疫介导疾病和鳞状细胞癌生长。本研究的主要目标是使用三种血吸虫蛋白预测并设计一种含有多个免疫显性B细胞表位的新型合成蛋白:XP-012801068.2、XP-012801892.2和XP-012793835.2。使用软件分析这些蛋白的一级、二级和三级结构(BepiPred、BcPred)。然后使用I-TASSER服务器评估B细胞构建体,并获得蛋白质的物理化学性质以及三维结构的同源建模。计算机分析揭示了具有高免疫原性的区域。对于XP-012801068.2,在292-334、3-22和314-333位残基之间发现了三个表位;对于XP-012801892.2,在184-236、81-100和329-348位残基中发现了三个表位;对于XP-012793835.2,在185-222、469-512、649-713和338-357位残基中发现了四个表位。构建体的平均长度为308bp,不稳定指数为49.96,理论PI为4.2,C评分为-1.59。此外,这些分析参数表明构建的多表位肽有可能为诊断试剂盒的开发提供理论基础。由Ramaswamy H. Sarma传达。