sitem Center for Translational Medicine and Biomedical Entrepreneurship, Personalised Medicine, University of Bern, Bern, Switzerland.
Department of Diagnostic-, Interventional- and Pediatric Radiology, Inselspital, University Hospital of Bern, Bern, Switzerland.
Int J Comput Assist Radiol Surg. 2022 Nov;17(11):2011-2021. doi: 10.1007/s11548-022-02714-z. Epub 2022 Aug 17.
Preservation surgery can halt the progress of joint degradation, preserving the life of the hip; however, outcome depends on the existing cartilage quality. Biochemical analysis of the hip cartilage utilizing MRI sequences such as delayed gadolinium-enhanced MRI of cartilage (dGEMRIC), in addition to morphological analysis, can be used to detect early signs of cartilage degradation. However, a complete, accurate 3D analysis of the cartilage regions and layers is currently not possible due to a lack of diagnostic tools.
A system for the efficient automatic parametrization of the 3D hip cartilage was developed. 2D U-nets were trained on manually annotated dual-flip angle (DFA) dGEMRIC for femoral head localization and cartilage segmentation. A fully automated cartilage sectioning pipeline for analysis of central and peripheral regions, femoral-acetabular layers, and a variable number of section slices, was developed along with functionality for the automatic calculation of dGEMRIC index, thickness, surface area, and volume.
The trained networks locate the femoral head and segment the cartilage with a Dice similarity coefficient of 88 ± 3 and 83 ± 4% on DFA and magnetization-prepared 2 rapid gradient-echo (MP2RAGE) dGEMRIC, respectively. A completely automatic cartilage analysis was performed in 18s, and no significant difference for average dGEMRIC index, volume, surface area, and thickness calculated on manual and automatic segmentation was observed.
An application for the 3D analysis of hip cartilage was developed for the automated detection of subtle morphological and biochemical signs of cartilage degradation in prognostic studies and clinical diagnosis. The segmentation network achieved a 4-time increase in processing speed without loss of segmentation accuracy on both normal and deformed anatomy, enabling accurate parametrization. Retraining of the networks with the promising MP2RAGE protocol would enable analysis without the need for B1 inhomogeneity correction in the future.
保肢手术可以阻止关节退化的进展,从而保留髋关节的功能;然而,手术效果取决于现有的软骨质量。利用 MRI 序列(如延迟钆增强 MRI 软骨成像(dGEMRIC))对髋关节软骨进行生化分析,除了形态学分析外,还可以用于检测软骨退化的早期迹象。然而,由于缺乏诊断工具,目前还无法对软骨区域和层进行完整、准确的 3D 分析。
开发了一种高效的髋关节软骨 3D 自动参数化系统。在手动标注的双翻转角(DFA)dGEMRIC 上对 2D U-net 进行训练,以定位股骨头和分割软骨。开发了一个全自动的软骨分段分析流水线,用于分析中央和外周区域、股骨髋臼层以及可变数量的分段切片,并具有自动计算 dGEMRIC 指数、厚度、表面积和体积的功能。
训练好的网络在 DFA 和磁化准备 2 快速梯度回波(MP2RAGE)dGEMRIC 上定位股骨头和分割软骨的 Dice 相似系数分别为 88±3%和 83±4%。全自动软骨分析在 18s 内完成,手动和自动分割计算的平均 dGEMRIC 指数、体积、表面积和厚度没有显著差异。
开发了一种用于髋关节软骨 3D 分析的应用程序,用于自动检测软骨退化的细微形态和生化迹象,可用于预后研究和临床诊断。分割网络在处理速度上提高了 4 倍,同时在正常和变形解剖结构上保持了分割精度,实现了准确的参数化。使用有前途的 MP2RAGE 方案对网络进行重新训练,将来可以在不需要 B1 不均匀性校正的情况下进行分析。