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(0,1)二进制序列中的波动行为。

Wave-like behaviour in (0,1) binary sequences.

机构信息

The Abdus Salam International Centre for Theoretical Physics, ICTP, Trieste, 34151, Italy.

出版信息

Sci Rep. 2022 Aug 17;12(1):13971. doi: 10.1038/s41598-022-18360-z.

DOI:10.1038/s41598-022-18360-z
PMID:35978136
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9383675/
Abstract

A comprehensive study of the properties of finite (0,1) binary systems from the mathematical viewpoint of quantum theory is presented. This is a quantum-inspired extension of the GenomeBits model to characterize observed genome sequences, where a complex wavefunction [Formula: see text] is considered as an analogous probability measure and it is related to an alternating (0,1) binary series having independent distributed terms. The real and imaginary spectrum of [Formula: see text] vs. the nucleotide base positions display characteristic features of sound waves. This approach represents a novel perspective for identifying and "observing" emergent properties of genome sequences in the form of wavefunctions via superposition states. The motivation is to develop a simple algorithm to perform wave calculations from binary sequences and to apply these wave functions to sonification.

摘要

从量子理论的数学角度出发,对有限(0,1)二进制系统的性质进行了全面研究。这是对 GenomeBits 模型的一种量子启发式扩展,用于描述观察到的基因组序列,其中复杂的波函数 [Formula: see text] 被视为类似的概率测度,并与具有独立分布项的交替(0,1)二进制序列相关联。[Formula: see text] 的实部和虚部与核苷酸碱基位置的关系显示出声波的特征。这种方法为通过叠加态以波函数的形式识别和“观察”基因组序列的涌现特性提供了新的视角。动机是开发一种简单的算法来从二进制序列执行波动计算,并将这些波函数应用于声音化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/72937a891eb6/41598_2022_18360_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/5ccc4761a748/41598_2022_18360_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/26af7863f33e/41598_2022_18360_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/450e525d71c6/41598_2022_18360_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/e73a582ca387/41598_2022_18360_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/7a05ddd752bd/41598_2022_18360_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/72937a891eb6/41598_2022_18360_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/5ccc4761a748/41598_2022_18360_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/26af7863f33e/41598_2022_18360_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/450e525d71c6/41598_2022_18360_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/e73a582ca387/41598_2022_18360_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/7a05ddd752bd/41598_2022_18360_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2550/9385706/72937a891eb6/41598_2022_18360_Fig6_HTML.jpg

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Biosystems. 2021 Mar;201:104328. doi: 10.1016/j.biosystems.2020.104328. Epub 2020 Dec 24.
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An auditory display tool for DNA sequence analysis.一种用于DNA序列分析的听觉显示工具。
BMC Bioinformatics. 2017 Apr 24;18(1):221. doi: 10.1186/s12859-017-1632-x.
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Observation of Gravitational Waves from a Binary Black Hole Merger.对双黑洞合并产生的引力波的观测。
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