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噬菌体展示技术的抗菌抗体:抗结核分枝杆菌异柠檬酸裂解酶的抗体抑制剂的鉴定。

Antimicrobial antibodies by phage display: Identification of antibody-based inhibitor against mycobacterium tuberculosis isocitrate lyase.

机构信息

Institute for Research in Molecular Medicine, Universiti Sains Malaysia, 11800 Penang, Malaysia.

Institut für Biochemie, Biotechnologie und Bioinformatik, Technische Universität Braunschweig, 38106 Braunschweig.

出版信息

Mol Immunol. 2022 Oct;150:47-57. doi: 10.1016/j.molimm.2022.08.005. Epub 2022 Aug 17.

DOI:10.1016/j.molimm.2022.08.005
PMID:35987135
Abstract

The increasing incidence reports of antibiotic resistance highlights the need for alternative approaches to deal with bacterial infections. This brought about the idea of utilizing monoclonal antibodies as an alternative antibacterial treatment. Majority of the studies are focused on developing antibodies to bacterial surface antigens, with little emphasis on antibodies that inhibit the growth mechanisms of a bacteria host. Isocitrate lyase (ICL) is an important enzyme for the growth and survival of Mycobacterium tuberculosis (MTB) during latent infection as a result of its involvement in the mycobacterial glyoxylate and methylisocitrate cycles. It is postulated that the inhibition of ICL can disrupt the life cycle of MTB. To this extent, we utilized antibody phage display to identify a single chain fragment variable (scFv) antibody against the recombinant ICL protein from MTB. The soluble a-ICL-C6 scFv clone exhibited good binding characteristics with high specificity against ICL. More importantly, the clone exhibited in vitro inhibitory effect with an enzymatic assay resulting in a decrease of ICL enzymatic activity. In silico analysis showed that the scFv-ICL interactions are driven by 23 hydrogen bonds and 13 salt bridges that might disrupt the formation of ICL subunits for the tertiary structure or the formation of active site β domain. However, further validation is necessary to confirm if the isolated clone is indeed a good inhibitor against ICL for application against MTB.

摘要

抗生素耐药性的发病率不断上升,凸显出需要寻找替代方法来应对细菌感染。这就催生了利用单克隆抗体作为替代抗菌治疗方法的想法。大多数研究都集中在开发针对细菌表面抗原的抗体上,而很少关注抑制细菌宿主生长机制的抗体。异柠檬酸裂解酶(ICL)是潜伏感染期间结核分枝杆菌(MTB)生长和存活的重要酶,因为它参与分枝杆菌乙醛酸和甲基异柠檬酸循环。据推测,ICL 的抑制作用可能会破坏 MTB 的生命周期。在这方面,我们利用抗体噬菌体展示技术来鉴定针对 MTB 重组 ICL 蛋白的单链片段可变(scFv)抗体。可溶性 a-ICL-C6 scFv 克隆表现出良好的结合特性,对 ICL 具有高度特异性。更重要的是,该克隆在体外抑制试验中表现出抑制作用,导致 ICL 酶活性降低。计算机分析表明,scFv-ICL 相互作用由 23 个氢键和 13 个盐桥驱动,这些氢键和盐桥可能破坏 ICL 亚基的三级结构或活性位点β结构域的形成。然而,需要进一步验证来确认分离出的克隆是否确实是 ICL 的良好抑制剂,以便应用于 MTB。

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