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新属,新种,一种嗜热嗜酸、专性外共生古菌,以及新科、新目和新纲的提议。

gen. nov., sp. nov., a thermoacidophilic, obligate ectosymbiotic archaeon, and proposal of fam. nov., ord. nov. and class. nov.

机构信息

Japan Collection of Microorganisms, RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan.

Graduate School of Life Sciences, Toyo University, Oura, Gunma 374-0193, Japan.

出版信息

Int J Syst Evol Microbiol. 2022 Aug;72(8). doi: 10.1099/ijsem.0.005489.

Abstract

A co-culture of a novel thermoacidophilic, obligate symbiotic archaeon, designated as strain MJ1, with its specific host archaeon strain MJ1HA was obtained from a terrestrial hot spring in Japan. Strain MJ1 grew in the co-culture under aerobic conditions. Coccoid cells of strain MJ1 were 200-500 nm in diameter, and attached to the MJ1HA cells in the co-culture. The ranges and optima of the growth temperature and pH of strain MJ1 in the co-culture were 60-75 °C (optimum, 65-70 °C) and pH 1.0-4.0 (optimum, pH 2.5), respectively. Core lipids of dialkyl glycerol tetraethers (GDGT)-3 and GDGT-4 were highly abundant in MJ1 cells concentrated from the co-culture. Strain MJ1 has a small genome (0.67 Mbp) lacking genes for biosynthesis of essential biomolecules, such as nucleotides, lipids and ATP. The genomic DNA G+C content was 24.9 mol%. The 16S rRNA gene sequence of strain MJ1 was most closely related to that of the cultivated species, ' strain N7A (85.8 % similarity). Based on phylogenetic and physiological characteristics, we propose the name gen. nov., sp. nov. to accommodate the strain MJ1 (=JCM 33616=DSM 111728). In addition, we propose the names fam. nov., ord. nov., and class. nov. to accommodate the novel genus.

摘要

从日本的一处陆地温泉中获得了一种新型嗜热嗜酸、专性共生古菌菌株 MJ1 及其特定宿主古菌菌株 MJ1HA 的共培养物。菌株 MJ1 在共培养物中于需氧条件下生长。菌株 MJ1 的球形细胞直径为 200-500nm,并附着在共培养物中的 MJ1HA 细胞上。在共培养物中,菌株 MJ1 的生长温度和 pH 的范围和最佳值分别为 60-75°C(最佳温度为 65-70°C)和 pH 1.0-4.0(最佳 pH 值为 2.5)。从共培养物中浓缩的 MJ1 细胞中富含二烷基甘油四醚(GDGT)-3 和 GDGT-4 的核心脂质。菌株 MJ1 的基因组较小(0.67 Mbp),缺乏核苷酸、脂质和 ATP 等必需生物分子的生物合成基因。基因组 DNA G+C 含量为 24.9mol%。菌株 MJ1 的 16S rRNA 基因序列与已培养的物种“N7A 株”最为相似(相似度为 85.8%)。基于系统发育和生理特性,我们建议将菌株 MJ1 命名为新属、新种,以容纳该菌株(=JCM 33616=DSM 111728)。此外,我们建议使用新科、新目和新纲来容纳这个新的属。

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