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属名新名,种名新名,一种新型嗜盐耐碱菌,从实验室培养的蓝藻物种中分离得到,并提议建立新的科名、新的科名、新的目名和新的目名。

gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium species and proposals of fam. nov., fam. nov., ord. nov. and ord. nov.

机构信息

Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, 33, bld. 2, Leninsky Ave., Moscow 119071, Russia.

Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, 33, bld. 2, Leninsky Ave., Moscow 119071, Russia.

出版信息

Int J Syst Evol Microbiol. 2021 Jan;71(1). doi: 10.1099/ijsem.0.004614. Epub 2020 Dec 22.

Abstract

A prosthecate bacterial strain, designated G-192, was isolated from decaying biomass of a haloalkaliphilic cyanobacterium sp. Z-T0701. The cells were aerobic, Gram-negative, non-endospore-forming and dimorphic, occurring either as sessile bacteria with a characteristic stalk or as motile flagellated cells. The strain utilized a limited range of substrates, mostly peptonaceous, but was able to degrade whole proteins. Growth occurred at 5-46 °C (optimum, 35-40 °C), pH 7.3-10.3 (optimum, pH 8.0-9.0), 0-14 % NaCl (v/w; optimum, 2.0-6.0 %, v/w). The G+C content of the genomic DNA of strain G-192 was 66.8%. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain G-192 formed a distinct evolutionary lineage within the family . Strain G-192 showed the highest 16S rRNA sequence similarity to ZYF765 (95.2%), GISW-4 (94.2%) and WD6-1 (95.5%). The major cellular fatty acids (>5% of the total) were C 9, C and 11-methyl-C ω7. The major polar lipids were glycolipids and phospholipids. The only respiratory quinone was ubiquinone-10 (Q-10). Based on polyphasic results including phylogenomic data, the novel strain could be distinguished from other genera, which suggests that strain G-192 represents a novel species of a new genus, for which the name gen. nov., sp. nov. is proposed. The type strain is G-192 (=VKM B-3306=KCTC 72746). The strain is the first representative of the stalked bacteria associated with a haloalkaliphilic cyanobacterium. Based on phylogenomic indices and phenotypic data, it is proposed to evolve two novel families fam. nov. and fam. nov. out of the current family . In addition, it is proposed to place the first two families in the novel order ord. nov. and novel order ord. nov. is proposed to accommodate the family .

摘要

从一株嗜盐碱性蓝藻的腐烂生物质中分离到一株 prosthecate 细菌菌株,命名为 G-192。细胞是需氧的,革兰氏阴性,非芽孢形成的,二态性的,以特征性的菌柄存在或作为运动鞭毛细胞。该菌株利用有限的底物范围,主要是蛋白胨,但能够降解完整的蛋白质。生长发生在 5-46°C(最佳,35-40°C),pH 7.3-10.3(最佳,pH 8.0-9.0),0-14%NaCl(v/w;最佳,2.0-6.0%,v/w)。菌株 G-192 的基因组 DNA 的 G+C 含量为 66.8%。16S rRNA 基因序列的系统发育分析表明,菌株 G-192 在家族内形成一个独特的进化谱系。菌株 G-192 与 ZYF765(95.2%)、GISW-4(94.2%)和 WD6-1(95.5%)的 16S rRNA 序列相似性最高。主要的细胞脂肪酸(占总脂肪酸的>5%)为 C9、C 和 11-甲基-Cω7。主要的极性脂是糖脂和磷脂。唯一的呼吸醌是泛醌-10(Q-10)。基于包括基因组数据在内的多相结果,新菌株可与其他属区分开来,表明菌株 G-192 代表一个新属的新种,建议使用新属名 gen. nov.,sp. nov.。模式菌株为 G-192(=VKM B-3306=KCTC 72746)。该菌株是与嗜盐碱性蓝藻相关的有菌柄细菌的第一个代表。基于基因组指数和表型数据,建议从当前家族中进化出两个新的家族 fam. nov. 和 fam. nov.。此外,建议将前两个家族归入新的目 ord. nov.,并建议将家族归入新的目 ord. nov.。

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