Chen Xi, Wang Ziyuan, Wang Jing, Yao Yifan, Wang Qian, Huang Jiahao, Xiang Xianping, Zhou Yifan, Xue Yintong, Li Yan, Gao Xiang, Wang Lijun, Chu Ming, Wang Yuedan
Department of Immunology, School of Basic Medical Sciences, Peking University. NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China.
State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, China.
Front Pharmacol. 2022 Aug 8;13:940628. doi: 10.3389/fphar.2022.940628. eCollection 2022.
Coronavirus disease 2019 (COVID-19) was caused by a new coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). SARS-CoV-2 utilizes human angiotensin converting enzyme 2 (hACE2) as the cellular receptor of its spike glycoprotein (SP) to gain entry into cells. Consequently, we focused on the potential of repurposing clinically available drugs to block the binding of SARS-CoV-2 to hACE2 by utilizing a novel artificial-intelligence drug screening approach. Based on the structure of S-RBD and hACE2, the pharmacophore of SARS-CoV-2-receptor-binding-domain (S-RBD) -hACE2 interface was generated and used to screen a library of FDA-approved drugs. A total of 20 drugs were retrieved as S-RBD-hACE2 inhibitors, of which 16 drugs were identified to bind to S-RBD or hACE2. Notably, tannic acid was validated to interfere with the binding of S-RBD to hACE2, thereby inhibited pseudotyped SARS-CoV-2 entry. Experiments involving competitive inhibition revealed that tannic acid competes with S-RBD and hACE2, whereas molecular docking proved that tannic acid interacts with the essential residues of S-RBD and hACE2. Based on the known antiviral activity and our findings, tannic acid might serve as a promising candidate for preventing and treating SARS-CoV-2 infection.
2019冠状病毒病(COVID-19)由一种新型冠状病毒——严重急性呼吸综合征冠状病毒2(SARS-CoV-2)引起。SARS-CoV-2利用人类血管紧张素转换酶2(hACE2)作为其刺突糖蛋白(SP)的细胞受体,从而进入细胞。因此,我们利用一种新型人工智能药物筛选方法,重点研究了重新利用临床可用药物来阻断SARS-CoV-2与hACE2结合的潜力。基于S-RBD和hACE2的结构,生成了SARS-CoV-2受体结合域(S-RBD)-hACE2界面的药效团,并用于筛选美国食品药品监督管理局(FDA)批准的药物库。共检索到20种作为S-RBD-hACE2抑制剂的药物,其中16种药物被鉴定为与S-RBD或hACE2结合。值得注意的是,单宁酸被证实可干扰S-RBD与hACE2的结合,从而抑制假型SARS-CoV-2的进入。竞争性抑制实验表明,单宁酸与S-RBD和hACE2竞争,而分子对接证明单宁酸与S-RBD和hACE2的关键残基相互作用。基于已知的抗病毒活性和我们的研究结果,单宁酸可能是预防和治疗SARS-CoV-2感染的有前景的候选药物。