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与动脉粥样硬化中氧化应激和巨噬细胞铁死亡相关的新型诊断生物标志物

Novel Diagnostic Biomarkers Related to Oxidative Stress and Macrophage Ferroptosis in Atherosclerosis.

作者信息

Li Minhui, Xin Siyuan, Gu Ruiyuan, Zheng Lin, Hu Jie, Zhang Ruijing, Dong Honglin

机构信息

Second Hospital of Shanxi Medical University, Taiyuan, Shanxi, China.

Baotou Medical College, Inner Mongolia, China.

出版信息

Oxid Med Cell Longev. 2022 Aug 5;2022:8917947. doi: 10.1155/2022/8917947. eCollection 2022.

Abstract

Atherosclerosis (AS) is a chronic inflammatory disease, which has a complex interplay between altered immune metabolism and oxidative stress. Therefore, we aimed to determine the oxidative stress and immune-related biomarkers in AS. Differential gene expression analyses are based on the GSE100927 dataset in the Gene Expression Omnibus (GEO), and 389 oxidative stress (OS) genes are identified based on gene set enrichment analysis (GSEA). We identified 74 differentially expressed genes related to oxidative stress (DEOSGs). "CIBERSORT" and "WGCNA" R Packages were used to compare the differences in immune infiltration levels between AS and control samples. The DEOSGs ( = 74) were intersected with the key module's genes of WGCNA ( = 972), and 27 differentially expressed immune-related oxidative stress genes (DEIOSGs) were obtained. To identify the pivotal genes, a protein-protein interaction (PPI) network was constructed using the STRING database and the Cytoscape software. , , , , and were identified as diagnostic markers of AS, and we validated them in the GSE57691 dataset. The expression levels of the five diagnostic genes were significantly highly expressed in the AS group. Correlation analysis and single-cell analysis revealed that five diagnostic genes were mainly correlated with macrophages M1. We, respectively, intersected differentially expressed genes (DEGs) with ferroptosis gene set, necroptosis gene set, and pyroptosis gene set. The findings suggested that and were differentially expressed genes of ferroptosis. High expression of five hub genes in RAW264.7 macrophages were confirmed by PCR. High and expression levels in plaque tissues were confirmed by immunohistochemistry (IHC) and western blotting. Our study identified that , , , , and were diagnostic genes of AS and associated with oxidative stress. and may be involved in the formation of the necrotic core in AS by regulating macrophage ferroptosis.

摘要

动脉粥样硬化(AS)是一种慢性炎症性疾病,在免疫代谢改变和氧化应激之间存在复杂的相互作用。因此,我们旨在确定AS中的氧化应激和免疫相关生物标志物。差异基因表达分析基于基因表达综合数据库(GEO)中的GSE100927数据集,并通过基因集富集分析(GSEA)鉴定出389个氧化应激(OS)基因。我们鉴定出74个与氧化应激相关的差异表达基因(DEOSGs)。使用“CIBERSORT”和“WGCNA”R包比较AS样本和对照样本之间免疫浸润水平的差异。将DEOSGs(n = 74)与WGCNA的关键模块基因(n = 972)进行交集分析,得到27个差异表达的免疫相关氧化应激基因(DEIOSGs)。为了鉴定关键基因,使用STRING数据库和Cytoscape软件构建了蛋白质-蛋白质相互作用(PPI)网络。鉴定出 、 、 、 和 作为AS的诊断标志物,并在GSE57691数据集中进行了验证。这五个诊断基因的表达水平在AS组中显著高表达。相关性分析和单细胞分析表明,五个诊断基因主要与M1巨噬细胞相关。我们分别将差异表达基因(DEGs)与铁死亡基因集、坏死性凋亡基因集和焦亡基因集进行交集分析。结果表明, 和 是铁死亡的差异表达基因。通过PCR证实了RAW264.7巨噬细胞中五个枢纽基因的高表达。通过免疫组织化学(IHC)和蛋白质印迹法证实了斑块组织中 和 的高表达水平。我们的研究确定 、 、 、 和 是AS的诊断基因,且与氧化应激相关。 和 可能通过调节巨噬细胞铁死亡参与AS坏死核心的形成。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0c/9410850/7d55827ef882/OMCL2022-8917947.001.jpg

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