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小鼠和人类多能干细胞向心肌细胞分化过程中的线粒体能量代谢转录组图谱

Mitochondrial energy metabolic transcriptome profiles during cardiac differentiation from mouse and human pluripotent stem cells.

作者信息

Cho Sung Woo, Kim Hyoung Kyu, Sung Ji Hee, Kim Yeseul, Kim Jae Ho, Han Jin

机构信息

Division of Cardiology, Department of Internal Medicine, Inje University College of Medicine, Ilsan Paik Hospital, Cardiac & Vascular Center, Goyang 10380, Korea.

Cardiovascular and Metabolic Disease Center, Smart Marine Therapeutics Center, Inje University College of Medicine, Busan 47392, Korea.

出版信息

Korean J Physiol Pharmacol. 2022 Sep 1;26(5):357-365. doi: 10.4196/kjpp.2022.26.5.357.

DOI:10.4196/kjpp.2022.26.5.357
PMID:36039736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9437366/
Abstract

Simultaneous myofibril and mitochondrial development is crucial for the cardiac differentiation of pluripotent stem cells (PSCs). Specifically, mitochondrial energy metabolism (MEM) development in cardiomyocytes is essential for the beating function. Although previous studies have reported that MEM is correlated with cardiac differentiation, the process and timing of MEM regulation for cardiac differentiation remain poorly understood. Here, we performed transcriptome analysis of cells at specific stages of cardiac differentiation from mouse embryonic stem cells (mESCs) and human induced PSCs (hiPSCs). We selected MEM genes strongly upregulated at cardiac lineage commitment and in a time-dependent manner during cardiac maturation and identified the protein-protein interaction networks. Notably, MEM proteins were found to interact closely with cardiac maturation-related proteins rather than with cardiac lineage commitment-related proteins. Furthermore, MEM proteins were found to primarily interact with cardiac muscle contractile proteins rather than with cardiac transcription factors. We identified several candidate MEM regulatory genes involved in cardiac lineage commitment (, , , , and in mESC-derived cells, and and in hiPSC-derived cells) and cardiac maturation (, , , and in mESC-derived cells, and and in hiPSC-derived cells). Therefore, our findings show the importance of MEM in cardiac maturation.

摘要

肌原纤维和线粒体的同步发育对于多能干细胞(PSC)的心脏分化至关重要。具体而言,心肌细胞中线粒体能量代谢(MEM)的发育对于心脏跳动功能至关重要。尽管先前的研究报道MEM与心脏分化相关,但对于心脏分化过程中MEM调控的过程和时间仍知之甚少。在这里,我们对小鼠胚胎干细胞(mESC)和人诱导多能干细胞(hiPSC)心脏分化特定阶段的细胞进行了转录组分析。我们选择了在心脏谱系定向时强烈上调且在心脏成熟过程中呈时间依赖性上调的MEM基因,并确定了蛋白质-蛋白质相互作用网络。值得注意的是,发现MEM蛋白与心脏成熟相关蛋白而非心脏谱系定向相关蛋白密切相互作用。此外,发现MEM蛋白主要与心肌收缩蛋白而非心脏转录因子相互作用。我们鉴定了几个参与心脏谱系定向(mESC来源的细胞中的 、 、 、 、 ,以及hiPSC来源的细胞中的 和 )和心脏成熟(mESC来源的细胞中的 、 、 、 ,以及hiPSC来源的细胞中的 和 )的候选MEM调控基因。因此,我们的研究结果表明MEM在心脏成熟中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/8d36543431d2/kjpp-26-5-357-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/26a77c28ff65/kjpp-26-5-357-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/dd855611719f/kjpp-26-5-357-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/f903c0074377/kjpp-26-5-357-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/4a8e952e0da9/kjpp-26-5-357-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/8d36543431d2/kjpp-26-5-357-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/26a77c28ff65/kjpp-26-5-357-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/dd855611719f/kjpp-26-5-357-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/f903c0074377/kjpp-26-5-357-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/4a8e952e0da9/kjpp-26-5-357-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e545/9437366/8d36543431d2/kjpp-26-5-357-f5.jpg

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本文引用的文献

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BMB Rep. 2021 Sep;54(9):464-469. doi: 10.5483/BMBRep.2021.54.9.046.
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PGC1/PPAR drive cardiomyocyte maturation at single cell level via YAP1 and SF3B2.PGC1/PPAR 通过 YAP1 和 SF3B2 驱动心肌细胞在单细胞水平上的成熟。
Nat Commun. 2021 Mar 12;12(1):1648. doi: 10.1038/s41467-021-21957-z.
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Mitochondria and metabolic transitions in cardiomyocytes: lessons from development for stem cell-derived cardiomyocytes.
心肌细胞中的线粒体和代谢转换:来自干细胞衍生的心肌细胞发育的启示。
Stem Cell Res Ther. 2021 Mar 12;12(1):177. doi: 10.1186/s13287-021-02252-6.
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Metabolic Regulation of Cardiac Differentiation and Maturation in Pluripotent Stem Cells: A Lesson from Heart Development.多能干细胞中心脏分化与成熟的代谢调控:来自心脏发育的启示
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Metabolic Maturation Media Improve Physiological Function of Human iPSC-Derived Cardiomyocytes.代谢成熟培养基可改善人诱导多能干细胞衍生心肌细胞的生理功能。
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