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量化增强小儿脑胶质瘤侵袭表型的空间亚克隆相互作用。

Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma.

机构信息

Evolutionary Genomics and Modelling Lab, Centre for Evolution and Cancer, The Institute of Cancer Research, London, UK; Glioma Team, The Institute of Cancer Research, London, UK.

Glioma Team, The Institute of Cancer Research, London, UK.

出版信息

Cell Rep. 2022 Aug 30;40(9):111283. doi: 10.1016/j.celrep.2022.111283.

Abstract

Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that may co-operate to drive pro-tumorigenic processes such as cellular invasion. However, a precise quantification of subclonal interactions is lacking, a problem that extends to other cancers. In this study, we combine spatial computational modeling of cellular interactions during invasion with co-evolution experiments of clonally disassembled patient-derived DMG cells. We design a Bayesian inference framework to quantify spatial subclonal interactions between molecular and phenotypically distinct lineages with different patterns of invasion. We show how this approach could discriminate genuine interactions, where one clone enhanced the invasive phenotype of another, from those apparently only due to the complex dynamics of spatially restricted growth. This study provides a framework for the quantification of subclonal interactions in DMG.

摘要

弥漫性中线脑胶质瘤(DMG)是一种高度侵袭性的、无法治愈的儿童脑肿瘤。由于许多因素的存在,包括异质性和弥漫性浸润,使得疾病的管理变得复杂,因此它们带来了临床挑战。最近的研究描述了亚克隆群体的存在,这些群体可能合作促进促肿瘤发生过程,如细胞浸润。然而,亚克隆相互作用的确切量化仍然缺乏,这个问题也存在于其他癌症中。在这项研究中,我们将细胞侵袭过程中的空间计算模型与克隆分离的患者来源的 DMG 细胞的共进化实验相结合。我们设计了一个贝叶斯推断框架来量化具有不同浸润模式的分子和表型不同的谱系之间的空间亚克隆相互作用。我们展示了这种方法如何区分真正的相互作用,即一个克隆增强另一个克隆的浸润表型,以及那些显然仅仅是由于空间限制生长的复杂动力学的相互作用。这项研究为 DMG 中亚克隆相互作用的量化提供了一个框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0695/9449134/5cc5f0ca1402/fx1.jpg

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