Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.
Departments of Biological Sciences, Chemistry, and Bioengineering, Lehigh University, Bethlehem, Pennsylvania.
Biophys J. 2022 Oct 18;121(20):3896-3906. doi: 10.1016/j.bpj.2022.08.044. Epub 2022 Sep 2.
The adaptability of proteins to their work environments is fundamental for cellular life. Here, we describe how the hemopexin-like domain of the multifunctional blood glycoprotein vitronectin binds Ca to adapt to excursions of temperature and shear stress. Using X-ray crystallography, molecular dynamics simulations, NMR, and differential scanning fluorimetry, we describe how Ca and its flexible hydration shell enable the protein to perform conformational changes that relay beyond the calcium-binding site and alter the number of polar contacts to enhance conformational stability. By means of mutagenesis, we identify key residues that cooperate with Ca to promote protein stability, and we show that calcium association confers protection against shear stress, a property that is advantageous for proteins that circulate in the vasculature, like vitronectin.
蛋白质对其工作环境的适应能力是细胞生命的基础。在这里,我们描述了多功能血液糖蛋白 vitronectin 的血影蛋白样结构域如何结合 Ca 以适应温度和剪切应力的变化。我们使用 X 射线晶体学、分子动力学模拟、NMR 和差示扫描荧光法来描述 Ca 及其灵活的水合壳如何使蛋白质能够进行构象变化,这种变化不仅可以在钙结合位点进行传递,还可以改变极性接触的数量,从而增强构象稳定性。通过突变分析,我们确定了与 Ca 协同作用以促进蛋白质稳定性的关键残基,并表明钙结合赋予了对剪切应力的保护,这对于像 vitronectin 这样在血管中循环的蛋白质是有利的。