Archaeal Biology Center, Institute for Advanced Study, Shenzhen Universitygrid.263488.3, Shenzhen, China.
Key Laboratory of Optoelectronic Devices and Systems, College of Physics and Optoelectronic Engineering, Shenzhen Universitygrid.263488.3, Shenzhen, China.
Microbiol Spectr. 2022 Oct 26;10(5):e0194722. doi: 10.1128/spectrum.01947-22. Epub 2022 Sep 6.
Water hypoxia (DO < 2 mg/L) is a growing global environmental concern that has the potential to significantly influence not only the aquatic ecosystem but also the benthic sedimentary ecosystem. The Changjiang River Estuary hypoxia, classified as one of the world's largest seasonal hypoxic water basins, has been reported to be expanding rapidly in recent decades. However, the microbial community dynamics and responses to this water hypoxia are still unclear. In this study, we examined the abundance, community composition, and distribution of sedimentary archaea, one important component of microbial communities in the Changjiang River Estuary and the East China Sea (ECS). Our results indicated that and were predominant archaeal groups in these research areas, with their 16S rRNA gene abundance ranged from 8.55 × 10 to 7.51 × 10 and 3.18 × 10 to 1.11 × 10 copies/g, respectively. The sedimentary archaeal community was mainly influenced by DO, together with the concentration of ammonium, nitrate, and sulfide. In addition, distinct differences in the archaeal community's composition, abundance, and driving factors were discovered between samples from hypoxia and non-hypoxia stations. Furtherly, microbial networks suggest various microbes leading the different activities in hypoxic and normoxic environments. and were "key stone" archaeal members of the low-DO network, whereas constituted a significant component of the high-DO network. Our results provide a clear picture of the sedimentary archaeal community in coastal hypoxia zones and indicates potential distinctions of archaea in hypoxia and non-hypoxia environments, including ecological niches and metabolic functions. In this study, the sedimentary archaeal community composition and abundance were detailed revealed and quantified based on 16S rRNA genes off the Changjiang River Estuary. We found that the community composition was distinct between hypoxia and non-hypoxia regions, while and dominated in non-hypoxia and hypoxia samples, respectively. In hypoxia regions, the sedimentary archaea were mainly affected by salinity, ammonium, and nitrate, whereas total organic carbon, total nitrogen, and sulfide were major influencing factors in non-hypoxia regions. The distinct microbial network may suggest the niche difference of archaeal community under various oxygen level.
水缺氧(DO < 2 mg/L)是一个日益严重的全球性环境问题,它不仅有可能对水生生态系统,而且对底栖沉积生态系统产生重大影响。长江口缺氧被列为世界上最大的季节性缺氧水体之一,据报道,近几十年来,其面积迅速扩大。然而,微生物群落对这种水缺氧的动态响应仍不清楚。在本研究中,我们研究了长江口和东海(ECS)沉积微生物群落的一个重要组成部分——古菌的丰度、群落组成和分布。结果表明,在这些研究区域中,和是主要的古菌类群,其 16S rRNA 基因丰度分别为 8.55×107.51×10 和 3.18×101.11×10 拷贝/g。沉积古菌群落主要受 DO 影响,同时还受到氨氮、硝酸盐和硫化物浓度的影响。此外,在缺氧和非缺氧站位的样品中,古菌群落的组成、丰度和驱动因素存在明显差异。进一步地,微生物网络表明,在缺氧和常氧环境中,不同的微生物主导着不同的活性。和是低 DO 网络中的“关键石”古菌成员,而则是高 DO 网络的重要组成部分。本研究提供了一个关于沿海缺氧区沉积古菌群落的清晰画面,并表明了在缺氧和非缺氧环境中,古菌在生态位和代谢功能上可能存在差异。本研究详细揭示和量化了长江口外沉积古菌的群落组成和丰度。我们发现,缺氧区和非缺氧区的群落组成存在明显差异,而非缺氧区和缺氧区的优势菌分别为和。在缺氧区,沉积物古菌主要受盐度、氨氮和硝酸盐的影响,而非缺氧区主要受总有机碳、总氮和硫化物的影响。明显的微生物网络可能表明在不同氧气水平下古菌群落的生态位差异。