Evans Daniel S
California Pacific Medical Center Research Institute, San Francisco, CA, USA.
Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, CA, USA.
Methods Mol Biol. 2022;2547:1-20. doi: 10.1007/978-1-0716-2573-6_1.
Making drug development more efficient by identifying promising drug targets can contribute to resource savings. Identifying promising drug targets using human genetic approaches can remove barriers related to translation. In addition, genetic information can be used to identify potentially causal relationships between a drug target and disease. Mendelian randomization (MR) is a class of approaches used to identify causal associations between pairs of genetically predicted traits using data from human genetic studies. MR can be used to prioritize candidate drug targets by predicting disease outcomes and adverse events that could result from the manipulation of a drug target. The theory behind MR is reviewed, including a discussion of MR assumptions, different MR analytical methods, tests for violations of assumptions, and MR methods that can be robust to some violations of MR assumptions. A protocol to perform two-sample MR (2SMR) with summary genome-wide association study (GWAS) results is described. An example of 2SMR examining the causal relationship between low-density lipoprotein (LDL) and coronary artery disease (CAD) is provided as an illustration of the protocol.
通过识别有前景的药物靶点来提高药物研发效率有助于节省资源。利用人类遗传学方法识别有前景的药物靶点可以消除与转化相关的障碍。此外,遗传信息可用于识别药物靶点与疾病之间潜在的因果关系。孟德尔随机化(MR)是一类利用人类遗传研究数据来识别成对遗传预测性状之间因果关联的方法。MR可通过预测药物靶点操纵可能导致的疾病结局和不良事件,来对候选药物靶点进行优先级排序。本文回顾了MR背后的理论,包括对MR假设、不同MR分析方法、假设违背检验以及对某些MR假设违背具有稳健性的MR方法的讨论。描述了一种使用全基因组关联研究(GWAS)汇总结果进行两样本MR(2SMR)的方案。作为该方案的示例,提供了一个2SMR研究低密度脂蛋白(LDL)与冠状动脉疾病(CAD)之间因果关系的例子。