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坎达拉克沙湾(白海)分层水生生态系统的微生物群落揭示了绿藻门和褐藻门形态型的进化历史。

Microbial communities of stratified aquatic ecosystems of Kandalaksha Bay (White Sea) shed light on the evolutionary history of green and brown morphotypes of Chlorobiota.

机构信息

SciBear OU, 10115 Tallinn, Estonia.

School of Marine and Atmospheric Sciences, Stony Brook University, 11794, Stony Brook, USA.

出版信息

FEMS Microbiol Ecol. 2022 Sep 24;98(10). doi: 10.1093/femsec/fiac103.

Abstract

Anoxygenic photoautotrophic metabolism of green sulfur bacteria of the family Chlorobiaceae played a significant role in establishing the Earth's biosphere. Two known major ecological forms of these phototrophs differ in their pigment composition and, therefore, in color: the green and brown forms. The latter form often occurs in low-light environments and is specialized to harvest blue light, which can penetrate to the greatest depth in the water column. In the present work, metagenomic sequencing was used to investigate the natural population of brown Chl. phaeovibrioides ZM in a marine stratified Zeleny Mys lagoon in the Kandalaksha Bay (the White Sea) to supplement the previously obtained genomes of brown Chlorobiaceae. The genomes of brown and green Chlorobiaceae were investigated using comparative genome analysis and phylogenetic and reconciliation analysis to reconstruct the evolution of these ecological forms. Our results support the suggestion that the last common ancestor of Chlorobiaceae belonged to the brown form, i.e. it was adapted to the conditions of low illumination. However, despite the vertical inheritance of these characteristics, among modern Chlorobiaceae populations, the genes responsible for synthesizing the pigments of the brown form are subject to active horizontal transfer.

摘要

绿硫细菌科的厌氧光自养代谢在地球生物圈的形成中发挥了重要作用。这些光养生物有两种已知的主要生态形式,它们的色素组成不同,因此颜色也不同:绿色形式和棕色形式。后者通常出现在低光环境中,专门用于收集能穿透水柱到达最大深度的蓝光。在本工作中,我们使用宏基因组测序来研究海洋分层泽列尼迈斯泻湖(白海)中棕色 Chl. phaeovibrioides ZM 的自然种群,以补充先前获得的棕色绿硫细菌科的基因组。我们使用比较基因组分析、系统发育和 reconcile 分析来研究棕色和绿色绿硫细菌科的基因组,以重建这些生态形式的进化。我们的结果支持这样的假设,即绿硫细菌科的最后一个共同祖先属于棕色形式,也就是说,它适应了低光照的条件。然而,尽管这些特征垂直遗传,但在现代绿硫细菌科种群中,负责合成棕色形式色素的基因会受到活跃的水平转移。

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