Department of Zoology, Graduate School of Science, Kyoto University, Kyoto, Sakyo, 606-8502, Japan.
Division of Evolutionary Developmental Biology, National Institute for Basic Biology, 38, Nishigonaka, Okazaki, Myodaiji, 444- 8585, Japan.
BMC Genomics. 2022 Sep 8;23(1):637. doi: 10.1186/s12864-022-08865-2.
The coevolutionary dynamics of corresponding male and female sexual traits, including genitalia, may be driven by complex genetic mechanisms. Carabus (Ohomopterus) ground beetles show correlated evolution in the size of their functionally corresponding male and female genital parts. To reveal the genetic mechanisms involved in the evolution of size, we investigated interspecific differences in gene expression profiles in four closely related species (two species each with long and short genital parts) using transcriptome data from genital tissues in the early and late pupal stages.
We detected 1536 and 1306 differentially expressed genes (DEGs) among the species in males and 546 and 1959 DEGs in females in the two pupal stages, respectively. The DEGs were clustered by species-specific expression profiles for each stage and sex to identify candidate gene clusters for genital size based on the expression patterns among the species and gene ontology. We identified one and two gene clusters in females and males, respectively, all from the late pupal stage; one cluster of each sex showed similar expression profiles in species with similar genital size, which implies a common gene expression change associated with similar genital size in each sex. However, the remaining male cluster showed different expression profiles between species with long genital parts, which implies species-specific gene expression changes. These clusters did not show sex-concordant expression profiles for genital size differences.
Our study demonstrates that sex-independent and partly species-specific gene expression underlies the correlated evolution of male and female genital size. These results may reflect the complex evolutionary history of male and female genitalia.
相应的雄性和雌性性特征(包括生殖器)的协同进化动态可能受到复杂的遗传机制的驱动。步甲科(Ohomopterus)地甲虫在其功能上相应的雄性和雌性生殖器部分的大小上表现出协同进化。为了揭示与大小进化相关的遗传机制,我们使用来自早期和晚期蛹期生殖器组织的转录组数据,在四个密切相关的物种(每个物种都有长和短生殖器)中调查了基因表达谱的种间差异。
我们在雄性两个蛹期和雌性两个蛹期分别检测到 1536 个和 1306 个差异表达基因(DEG)。根据每个阶段和性别的物种特异性表达谱,对 DEG 进行聚类,以根据种间和基因本体论的表达模式确定基于生殖器大小的候选基因聚类。我们在雌性和雄性中分别鉴定出一个和两个基因簇,均来自晚期蛹期;每个性别的一个簇显示出具有相似生殖器大小的物种之间相似的表达谱,这暗示了与每个性别相似的生殖器大小相关的共同基因表达变化。然而,其余雄性簇在具有长生殖器的物种之间表现出不同的表达谱,这暗示了物种特异性的基因表达变化。这些簇没有表现出与生殖器大小差异相关的性别一致的表达谱。
我们的研究表明,独立于性别的和部分物种特异性的基因表达是雄性和雌性生殖器大小协同进化的基础。这些结果可能反映了雄性和雌性生殖器的复杂进化历史。