School of Basic Medicine, Gannan Medical University, Ganzhou 341000, China.
Key Laboratory of Biomaterials and Biofabrication in Tissue Engineering of Jiangxi Province, Ganzhou 341000, China.
Int J Mol Sci. 2022 Aug 25;23(17):9611. doi: 10.3390/ijms23179611.
Despite growing evidence suggesting the critical function of in cancer initiation and development, a systematic pancancer analysis of is lacking. Herein, we present a comprehensive study of which aimed to explore its potential role and detailed mechanisms across 33 human tumors based on The Cancer Genome Atlas (TCGA) and Clinical Proteomic Tumor Analysis Consortium (CATPAC) databases. As a result, both gene and protein levels of were found to be increased in various tumor tissues, including breast invasive carcinoma (BRCA), colon adenocarcinoma (COAD), hepatocellular carcinoma (LIHC), lung adenocarcinoma (LUAD), and head and neck squamous cell carcinoma (HNSC) as compared with corresponding normal tissues. Meanwhile, dysregulated expression was found to be closely related to pathological stage and prognosis in several cancers, including LIHC, ovarian serous cystadenocarcinoma (OV), and bladder urothelial carcinoma (BLCA). The DNA methylation level of was found to be decreased in most cancers and to be negatively associated with expression. Furthermore, expression was determined to be significantly associated with levels of infiltrating cells and immune checkpoint genes, including . Analysis of -related genes revealed that RNA metabolism pathways, including "ribosome biogenesis", "spliceosome", and "RNA transport", were mainly involved in the functional mechanism of in human cancers. In summary, this pancancer study characterized the relationship between expression and clinicopathologic features in multiple cancer types and further showed its potential regulatory network in human cancers. It represents a systemic analysis for further functional and therapeutic studies of and highlights its predictive value with respect to the carcinogenesis and prognosis of various cancers, especially LIHC.
尽管越来越多的证据表明在癌症的发生和发展中具有关键作用,但缺乏对的系统泛癌症分析。在此,我们根据癌症基因组图谱 (TCGA) 和临床蛋白质肿瘤分析联盟 (CATPAC) 数据库,对进行了全面研究,旨在探索其在 33 种人类肿瘤中的潜在作用和详细机制。结果表明,与相应的正常组织相比,各种肿瘤组织(包括乳腺浸润性癌(BRCA)、结肠腺癌(COAD)、肝细胞癌(LIHC)、肺腺癌(LUAD)和头颈部鳞状细胞癌(HNSC))中基因和蛋白水平均升高。同时,在几种癌症中,失调的表达与病理分期和预后密切相关,包括 LIHC、卵巢浆液性囊腺癌(OV)和膀胱癌(BLCA)。的 DNA 甲基化水平在大多数癌症中降低,与表达呈负相关。此外,表达与浸润细胞和免疫检查点基因水平显著相关,包括。与相关基因的分析表明,RNA 代谢途径,包括“核糖体生物发生”、“剪接体”和“RNA 转运”,主要参与了在人类癌症中作用的功能机制。总之,这项泛癌症研究描述了在多种癌症类型中与临床病理特征之间的关系,并进一步显示了其在人类癌症中的潜在调节网络。它代表了对进一步功能和治疗研究的系统分析,并强调了其对各种癌症(尤其是 LIHC)发生和预后的预测价值。