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地理与气候如何塑造意大利本地牛和绵羊品种的基因组多样性

How Geography and Climate Shaped the Genomic Diversity of Italian Local Cattle and Sheep Breeds.

作者信息

Senczuk Gabriele, Criscione Andrea, Mastrangelo Salvatore, Biscarini Filippo, Marletta Donata, Pilla Fabio, Laloë Denis, Ciampolini Roberta

机构信息

Dipartimento di Agricoltura, Ambiente e Alimenti, Università del Molise, 86100 Campobasso, Italy.

Dipartimento Agricoltura, Alimentazione e Ambiente, University of Catania, 95131 Catania, Italy.

出版信息

Animals (Basel). 2022 Aug 26;12(17):2198. doi: 10.3390/ani12172198.

Abstract

Understanding the relationships among geography, climate, and genetics is increasingly important for animal farming and breeding. In this study, we examine these inter-relationships in the context of local cattle and sheep breeds distributed along the Italian territory. To this aim, we used redundancy analysis on genomic data from previous projects combined with geographical coordinates and corresponding climatic data. The effect of geographic factors (latitude and longitude) was more important in sheep (26.4%) than that in cattle (13.8%). Once geography had been partialled out of analysis, 10.1% of cattle genomic diversity and 13.3% of that of sheep could be ascribed to climatic effects. Stronger geographic effects in sheep can be related to a combination of higher pre-domestication genetic variability together with biological and productive specificities. Climate alone seems to have had less impact on current genetic diversity in both species, even if climate and geography are greatly confounded. Results confirm that both species are the result of complex evolutionary histories triggered by interactions between human needs and environmental conditions.

摘要

了解地理、气候和遗传学之间的关系对畜牧业和育种越来越重要。在本研究中,我们在意大利领土上分布的当地牛和羊品种的背景下研究了这些相互关系。为此,我们对先前项目的基因组数据结合地理坐标和相应的气候数据进行了冗余分析。地理因素(纬度和经度)对绵羊(26.4%)的影响比对牛(13.8%)的影响更大。一旦在分析中排除地理因素,牛基因组多样性的10.1%和绵羊基因组多样性的13.3%可归因于气候效应。绵羊中更强的地理效应可能与驯化前更高的遗传变异性以及生物学和生产特异性的组合有关。即使气候和地理因素高度混杂,单独的气候似乎对这两个物种当前的遗传多样性影响较小。结果证实,这两个物种都是人类需求与环境条件相互作用引发的复杂进化历史的结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8615/9454691/d1e1560ca94a/animals-12-02198-g001.jpg

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