Department of Clinical Laboratory and Biomedical Sciences, Osaka University, Suita, Osaka 565-0871, Japan.
Graduate School of Medicine, Center for Twin Research, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan.
J Clin Endocrinol Metab. 2022 Dec 17;108(1):144-154. doi: 10.1210/clinem/dgac532.
Clarification of the association among phenotypes, genetic, and environmental factors with clinical laboratory traits can reveal the cause of diseases and assist in developing methods for the prediction and prevention of diseases. It is difficult to investigate the environmental effect on phenotypes using individual samples because their genetic and environmental factors differ, but we can easily investigate the influence of environmental factors using monozygotic (MZ) twins because they have the same genetic factors.
We aimed to examine the methylation level of CpG sites as an environmental factor affecting adiponectin levels on the basis of the same genetic background using MZ twins and to identify the epigenetic factors related to adiponectin levels and the genetic factors associated with sensitivity to acquired changes in adiponectin.
Using 2 groups built from each twin of 232 MZ twin pairs, we performed a replicated epigenome-wide association study to clarify the epigenetic factors affecting adiponectin levels adjusted by genetic risk score. Moreover, we divided twin pairs into concordant and discordant for adiponectin levels. We conducted a genome-wide association study to identify a genetic background specific for discordance.
Methylation levels at 38 CpG sites were reproducibly associated with adjusted adiponectin levels, and some of these CpG sites were in genes related to adiponectin, including CDH13. Some genes related to adiponectin or insulin resistance were found to be genetic factors specific for discordance.
We clarified specific epigenetic factors affecting adiponectin levels and genetic factors associated with sensitivity to acquired changes in adiponectin.
阐明表型、遗传和环境因素与临床实验室特征之间的关联,可以揭示疾病的病因,并有助于开发疾病预测和预防方法。由于个体样本的遗传和环境因素不同,因此很难研究环境对表型的影响,但我们可以使用同卵(MZ)双胞胎轻松研究环境因素的影响,因为它们具有相同的遗传因素。
我们旨在根据 MZ 双胞胎的相同遗传背景,检查 CpG 位点的甲基化水平作为影响脂联素水平的环境因素,并确定与脂联素水平相关的表观遗传因素和与脂联素敏感性相关的遗传因素获得性变化。
使用由 232 对 MZ 双胞胎中的每对双胞胎组成的 2 组,我们进行了重复的表观基因组全关联研究,以阐明受遗传风险评分调整的影响脂联素水平的表观遗传因素。此外,我们将双胞胎对分为脂联素水平一致和不一致的组。我们进行了全基因组关联研究,以确定不一致的特定遗传背景。
38 个 CpG 位点的甲基化水平与调整后的脂联素水平可重复相关,其中一些 CpG 位点位于与脂联素相关的基因中,包括 CDH13。一些与脂联素或胰岛素抵抗相关的基因被发现是不一致的特定遗传因素。
我们阐明了影响脂联素水平的特定表观遗传因素和与脂联素获得性变化敏感性相关的遗传因素。