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高通量、平行流式细胞术筛选数百个细胞表面抗原的荧光条码技术

High-Throughput, Parallel Flow Cytometry Screening of Hundreds of Cell Surface Antigens Using Fluorescent Barcoding.

机构信息

Department of Cytokinetics, Institute of Biophysics of the Czech Academy of Sciences, Brno, Czech Republic.

International Clinical Research Center, St. Anne's University Hospital in Brno, Brno, Czech Republic.

出版信息

Methods Mol Biol. 2022;2543:99-111. doi: 10.1007/978-1-0716-2553-8_9.

DOI:10.1007/978-1-0716-2553-8_9
PMID:36087262
Abstract

Multicolor flow cytometry allows for analysis of tens of cellular parameters in millions of cells at a single-cell resolution within minutes. The lack of technologies that would facilitate feasible and relatively cheap profiling of such a number of cells with an antibody-based approach led us to the development of a high-throughput cytometry-based platform for surface profiling. We coupled the fluorescent cell barcoding with preexisting, commercially available screening tools to analyze cell surface fingerprint at a large scale. This powerful approach will help to identify novel biomarkers and druggable targets and facilitate the discovery of new concepts in immunology, oncology, and developmental biology.

摘要

多色流式细胞术允许在数分钟内以单细胞分辨率分析数以百万计的细胞中的数十个细胞参数。缺乏能够以基于抗体的方法实现这种数量的细胞的可行且相对便宜的分析的技术,促使我们开发了一种高通量基于细胞术的表面分析平台。我们将荧光细胞条码与现有的商业上可用的筛选工具相结合,以大规模分析细胞表面指纹。这种强大的方法将有助于鉴定新的生物标志物和可用药靶,并促进免疫学、肿瘤学和发育生物学领域新概念的发现。

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Combining fluorescent cell barcoding and flow cytometry-based phospho-ERK1/2 detection at short time scales in adherent cells.在贴壁细胞中结合荧光细胞条码和基于流式细胞术的短时间尺度磷酸化 ERK1/2 检测。
Cytometry A. 2019 Feb;95(2):192-200. doi: 10.1002/cyto.a.23602. Epub 2018 Oct 2.
2
Plasticity and intratumoural heterogeneity of cell surface antigen expression in breast cancer.乳腺癌细胞表面抗原表达的可塑性和肿瘤内异质性。
Br J Cancer. 2018 Mar 20;118(6):813-819. doi: 10.1038/bjc.2017.497. Epub 2018 Feb 20.
3
Optimization and standardization of fluorescent cell barcoding for multiplexed flow cytometric phenotyping.
用于多重流式细胞术表型分析的荧光细胞条形码的优化与标准化
Cytometry A. 2017 Jul;91(7):694-703. doi: 10.1002/cyto.a.23162. Epub 2017 Jul 10.
4
Fluorescent cell barcoding in flow cytometry allows high-throughput drug screening and signaling profiling.流式细胞术中的荧光细胞条形码技术可实现高通量药物筛选和信号分析。
Nat Methods. 2006 May;3(5):361-8. doi: 10.1038/nmeth872.