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在 Jupyter Notebooks 中进行生物化学和分子生物学的 Python 脚本编写。

Python scripting for biochemistry and molecular biology in Jupyter Notebooks.

机构信息

School of Chemistry & Materials Science, Rochester Institute of Technology, Rochester, New York, USA.

Molecular Sciences Software Institute, Blacksburg, Virginia, USA.

出版信息

Biochem Mol Biol Educ. 2022 Sep;50(5):479-482. doi: 10.1002/bmb.21676. Epub 2022 Sep 12.

Abstract

A programming workshop has been developed for biochemists and molecular biologists to introduce them to the power and flexibility of solving problems with Python. The workshop is designed to move users beyond a "plug-and-play" approach that is based on spreadsheets and web applications in their teaching and research to writing scripts to parse large collections of data and to perform dynamic calculations. The live-coding workshop is designed to introduce specific coding skills, as well as provide insight into the broader array of open-access resources and libraries that are available for scientific computation.

摘要

已为生物化学家及分子生物学家开发了一个编程研习班,旨在向他们介绍使用 Python 解决问题的强大功能和灵活性。该研习班旨在将用户从基于电子表格和网络应用程序的“即插即用”方法中转移出来,转向编写脚本来解析大量数据并进行动态计算。现场编码研习班旨在介绍特定的编码技能,并深入了解可用于科学计算的更广泛的开放访问资源和库。

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