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土耳其尼德省甘蓝田中1945年十字花科异皮线虫(富兰克林)的分子特征分析

Molecular characterization of Heterodera cruciferae Franklin, 1945 from cabbage fields in Niğde province, Turkey.

作者信息

Toktay Halil, Akyol Badel G, Evlice Emre, İmren Mustafa

机构信息

Department of Plant Production and Technologies, Faculty of Agricultural Sciences and Technologies, University of Nigde, Nigde, Turkey.

Department of Plant Protection, Faculty of Agricultural Sciences and Technologies, Sivas University of Science and Technology, 58140, Sivas, Turkey.

出版信息

Mol Biol Rep. 2022 Dec;49(12):11557-11562. doi: 10.1007/s11033-022-07860-w. Epub 2022 Sep 12.

DOI:10.1007/s11033-022-07860-w
PMID:36097115
Abstract

BACKGROUND

The aim of this study was to identified cyst nematodes in the cabbage production areas in Niğde Province by molecular methods to underpin decision making for field control. The sequences of ribosomal DNA region (rDNA-ITS) and cytochrome oxidase subunit 1 (mtDNA-COI) were used for the first time for identification Heterodera cruciferae (cabbage cyst nematode) in Turkey.

METHODS AND RESULTS

Heterodera cruciferae populations extracted from cabbage growing areas of Niğde Province and investigated using sequences of rDNA-ITS and mtDNA-COI. Similarities and differences between 13 geographic populations of H. cruciferae were detected in surveys during 2020-2021. DNA from single cysts was successfully amplified, and genetic variability was revealed within nematode populations. Based on these results, H. cruciferae is reported for the first time from Niğde Province, Turkey. This study showed clear discrimination among the sampled populations of H. cruciferae.

CONCLUSION

This finding is important for control and managing cabbage cyst nematode in cabbage fields in Turkey as more than one Heterodera spp. can occur. Future studies should investigate the population dynamics and control of H. cruciferae in fields in the sampled districts.

摘要

背景

本研究旨在通过分子方法鉴定尼德省卷心菜产区的孢囊线虫,为田间防治决策提供依据。核糖体DNA区域(rDNA-ITS)和细胞色素氧化酶亚基1(mtDNA-COI)序列首次用于土耳其十字花科异皮线虫(卷心菜孢囊线虫)的鉴定。

方法与结果

从尼德省卷心菜种植区提取十字花科异皮线虫种群,并利用rDNA-ITS和mtDNA-COI序列进行研究。在2020 - 2021年的调查中检测到13个十字花科异皮线虫地理种群之间的异同。成功扩增了单个孢囊的DNA,并揭示了线虫种群内的遗传变异性。基于这些结果,首次报道了土耳其尼德省存在十字花科异皮线虫。本研究显示了所采样的十字花科异皮线虫种群之间的明显差异。

结论

这一发现对于土耳其卷心菜田防治和管理卷心菜孢囊线虫具有重要意义,因为可能会出现不止一种异皮线虫属物种。未来的研究应调查采样地区田间十字花科异皮线虫的种群动态和防治情况。

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本文引用的文献

1
Pathogenicity and Host-Parasite Relationships of Heterodera cruciferae in Cabbage.十字花科根结线虫在甘蓝上的致病性及寄主-寄生虫关系
Plant Dis. 2013 Mar;97(3):333-338. doi: 10.1094/PDIS-07-12-0699-RE.
2
First Report of Carrot Cyst Nematode in Mexico: Morphological, Molecular Characterization, and Host Range Study.墨西哥胡萝卜孢囊线虫的首次报道:形态学、分子特征及寄主范围研究
J Nematol. 2018 Sep 3;50(2):229-242. doi: 10.21307/jofnem-2018-021.
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MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.MEGA X:跨越计算平台的分子进化遗传学分析。
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549. doi: 10.1093/molbev/msy096.
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Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades.基于小亚基核糖体DNA的全门类分析揭示了线虫之间深层的系统发育关系以及向冠群进化的加速演化。
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