• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于结构的蛋白质工程提高纤维二糖水解酶的催化活性和碱性稳定性

Enhancement of catalytic activity and alkaline stability of cellobiohydrolase by structure-based protein engineering.

作者信息

Prabmark Kanoknart, Boonyapakron Katewadee, Bunterngsook Benjarat, Arunrattanamook Nattapol, Uengwetwanit Tanaporn, Chitnumsub Penchit, Champreda Verawat

机构信息

Enzyme Technology Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, 113 Thailand Science Park, Phahonyothin Road, Khlong Luang, Pathum Thani, 12120 Thailand.

Microarray Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, 113 Thailand Science Park, Phahonyothin Road, Khlong Luang, Pathum Thani, 12120 Thailand.

出版信息

3 Biotech. 2022 Oct;12(10):269. doi: 10.1007/s13205-022-03339-4. Epub 2022 Sep 9.

DOI:10.1007/s13205-022-03339-4
PMID:36097631
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9463429/
Abstract

UNLABELLED

Alkaline cellobiohydrolases have the potential for application in various industries, including pulp processing and laundry where operation under high pH conditions is preferred. In this study, variants of Cel6A cellobiohydrolase from were generated by structural-based protein engineering with the rationale of increasing catalytic activity and alkaline stability. The variants included removal of the carbohydrate-binding module (CBM) and substitution of residues 173 and 200. The CBM-deleted enzyme with Y200F mutation predicted to mediate conformational change at the N-terminal loop demonstrated increased alkaline stability at 60 °C, pH 8.0 for 24 h up to 2.25-fold compared with the wild-type enzyme. Another CBM-deleted enzyme with L173E mutation predicted to induce a new hydrogen bond in the substrate-binding cleft showed enhanced hydrolysis yield of pretreated sugarcane trash up to 4.65-fold greater than that of the wild-type enzyme at the pH 8.0. The variant enzymes could thus be developed for applications on cellulose hydrolysis and plant fiber modification operated under alkaline conditions.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s13205-022-03339-4.

摘要

未标记

碱性纤维二糖水解酶有潜力应用于各种行业,包括纸浆加工和洗衣业,在这些行业中,在高pH条件下操作更为可取。在本研究中,通过基于结构的蛋白质工程技术,以提高催化活性和碱性稳定性为目的,对来自[具体来源未提及]的Cel6A纤维二糖水解酶进行了变体改造。这些变体包括去除碳水化合物结合模块(CBM)以及替换173位和200位残基。预测Y200F突变的CBM缺失酶可介导N端环构象变化,在60°C、pH 8.0条件下24小时的碱性稳定性比野生型酶提高了2.25倍。另一种预测L173E突变的CBM缺失酶可在底物结合裂隙中诱导形成新的氢键,在pH 8.0时,预处理甘蔗渣的水解产率比野生型酶提高了4.65倍。因此,这些变体酶可用于碱性条件下的纤维素水解和植物纤维改性应用。

补充信息

在线版本包含可在10.1007/s13205-022-03339-4获取的补充材料。

相似文献

1
Enhancement of catalytic activity and alkaline stability of cellobiohydrolase by structure-based protein engineering.基于结构的蛋白质工程提高纤维二糖水解酶的催化活性和碱性稳定性
3 Biotech. 2022 Oct;12(10):269. doi: 10.1007/s13205-022-03339-4. Epub 2022 Sep 9.
2
Structure of the catalytic core module of the Chaetomium thermophilum family GH6 cellobiohydrolase Cel6A.嗜热毛壳菌家族GH6纤维二糖水解酶Cel6A催化核心模块的结构
Acta Crystallogr D Biol Crystallogr. 2012 Aug;68(Pt 8):875-82. doi: 10.1107/S0907444912016496. Epub 2012 Jul 7.
3
Effect of carbohydrate binding modules alterations on catalytic activity of glycoside hydrolase family 6 exoglucanase from Chaetomium thermophilum to cellulose.碳水化合物结合模块改变对嗜热毛壳菌糖苷水解酶家族 6 外切纤维素酶催化活性对纤维素的影响。
Int J Biol Macromol. 2021 Nov 30;191:222-229. doi: 10.1016/j.ijbiomac.2021.09.002. Epub 2021 Sep 8.
4
Purification and Characterization of a Thermostable Cellobiohydrolase from Thermotoga petrophila.嗜热栖热袍菌中一种耐热纤维二糖水解酶的纯化与特性分析
Protein Pept Lett. 2018;25(11):1003-1014. doi: 10.2174/0929866525666181108101824.
5
Enhancement of catalytic activity and thermostability of a thermostable cellobiohydrolase from Chaetomium thermophilum by site-directed mutagenesis.通过定点突变提高嗜热毛壳菌耐热纤维二糖水解酶的催化活性和热稳定性。
Int J Biol Macromol. 2018 Sep;116:691-697. doi: 10.1016/j.ijbiomac.2018.05.088. Epub 2018 May 20.
6
Engineering chimeric thermostable GH7 cellobiohydrolases in Saccharomyces cerevisiae.在酿酒酵母中工程改造嵌合耐热 GH7 纤维二糖水解酶。
Appl Microbiol Biotechnol. 2014 Apr;98(7):2991-3001. doi: 10.1007/s00253-013-5177-2. Epub 2013 Aug 23.
7
Directed evolution and structural prediction of cellobiohydrolase II from the thermophilic fungus Chaetomium thermophilum.嗜热真菌 Chaetomium thermophilum 来源的纤维二糖水解酶 II 的定向进化和结构预测。
Appl Microbiol Biotechnol. 2012 Sep;95(6):1469-78. doi: 10.1007/s00253-011-3799-9. Epub 2012 Jan 4.
8
Cloning, expression, and characterization of novel thermostable family 7 cellobiohydrolases.新型热稳定7家族纤维二糖水解酶的克隆、表达及特性研究
Biotechnol Bioeng. 2008 Oct 15;101(3):515-28. doi: 10.1002/bit.21940.
9
Structure-based protein engineering for thermostable and alkaliphilic enhancement of endo-β-1,4-xylanase for applications in pulp bleaching.基于结构的蛋白质工程提高内切-β-1,4-木聚糖酶的热稳定性和碱性,以应用于纸浆漂白。
J Biotechnol. 2017 Oct 10;259:95-102. doi: 10.1016/j.jbiotec.2017.07.035. Epub 2017 Jul 31.
10
Biochemical and structural insights into a thermostable cellobiohydrolase from Myceliophthora thermophila.嗜热真菌木聚糖酶的生化和结构分析
FEBS J. 2018 Feb;285(3):559-579. doi: 10.1111/febs.14356. Epub 2018 Jan 1.

引用本文的文献

1
Enhancement of the degradation capacity of PETase by acidic amino acids insertion and carbohydrate-binding module fusion.通过插入酸性氨基酸和融合碳水化合物结合模块增强PET水解酶的降解能力。
3 Biotech. 2024 Sep;14(9):195. doi: 10.1007/s13205-024-04041-3. Epub 2024 Aug 7.
2
Functional characterisation of a new halotolerant seawater active glycoside hydrolase family 6 cellobiohydrolase from a salt marsh.从盐沼中筛选到一株新的耐盐海水活性糖苷水解酶家族 6 纤维二糖水解酶,对其功能进行了表征。
Sci Rep. 2024 Feb 8;14(1):3205. doi: 10.1038/s41598-024-53886-4.

本文引用的文献

1
Effect of carbohydrate binding modules alterations on catalytic activity of glycoside hydrolase family 6 exoglucanase from Chaetomium thermophilum to cellulose.碳水化合物结合模块改变对嗜热毛壳菌糖苷水解酶家族 6 外切纤维素酶催化活性对纤维素的影响。
Int J Biol Macromol. 2021 Nov 30;191:222-229. doi: 10.1016/j.ijbiomac.2021.09.002. Epub 2021 Sep 8.
2
Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
3
An engineered cellobiohydrolase I for sustainable degradation of lignocellulosic biomass.一种工程化的纤维二糖水解酶 I 可实现木质纤维素生物质的可持续降解。
Biotechnol Bioeng. 2021 Oct;118(10):4014-4027. doi: 10.1002/bit.27877. Epub 2021 Jul 12.
4
Molecular origins of reduced activity and binding commitment of processive cellulases and associated carbohydrate-binding proteins to cellulose III.III 型纤维素上具有延伸活性的纤维素酶和相关碳水化合物结合蛋白活性和结合能力降低的分子起源。
J Biol Chem. 2021 Jan-Jun;296:100431. doi: 10.1016/j.jbc.2021.100431. Epub 2021 Feb 19.
5
Enhancement of catalytic performance of a metagenome-derived thermophilic oligosaccharide-specific xylanase by binding module removal and random mutagenesis.通过去除结合模块和随机突变提高来源于宏基因组的嗜热寡糖特异性木聚糖酶的催化性能。
J Biosci Bioeng. 2021 Jan;131(1):13-19. doi: 10.1016/j.jbiosc.2020.09.008. Epub 2020 Oct 14.
6
Characterization of two thermophilic cellulases from Talaromyces leycettanus JCM12802 and their synergistic action on cellulose hydrolysis.从嗜热真菌塔宾曲霉 JCM12802 中鉴定出两种耐热纤维素酶及其在纤维素水解中的协同作用。
PLoS One. 2019 Nov 15;14(11):e0224803. doi: 10.1371/journal.pone.0224803. eCollection 2019.
7
Designing cellulolytic enzyme systems for biorefinery: From nature to application.设计用于生物炼制的纤维素酶系统:从自然到应用。
J Biosci Bioeng. 2019 Dec;128(6):637-654. doi: 10.1016/j.jbiosc.2019.05.007. Epub 2019 Jun 13.
8
Carbohydrate binding modules enhance cellulose enzymatic hydrolysis by increasing access of cellulases to the substrate.碳水化合物结合模块通过增加纤维素酶与底物的接触来提高纤维素的酶解效率。
Carbohydr Polym. 2019 May 1;211:57-68. doi: 10.1016/j.carbpol.2019.01.108. Epub 2019 Jan 31.
9
Rate-limiting step and substrate accessibility of cellobiohydrolase Cel6A from Trichoderma reesei.里氏木霉纤维二糖水解酶 Cel6A 的限速步骤和底物可及性。
FEBS J. 2018 Dec;285(23):4482-4493. doi: 10.1111/febs.14668. Epub 2018 Oct 17.
10
Who's on base? Revealing the catalytic mechanism of inverting family 6 glycoside hydrolases.谁在“基地”?揭示第6类转化型糖苷水解酶的催化机制。
Chem Sci. 2016 Sep 1;7(9):5955-5968. doi: 10.1039/c6sc00571c. Epub 2016 Jun 1.