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SOCS1 蛋白的环状拟肽的即席修饰:结构和功能的见解。

Ad-hoc modifications of cyclic mimetics of SOCS1 protein: Structural and functional insights.

机构信息

Department of Pharmacy, University of Naples "Federico II", 80131, Naples, Italy.

CONCEPT Lab, Istituto Italiano di Tecnologia (IIT), Via E. Melen, 83, I-16152, Genova, Italy.

出版信息

Eur J Med Chem. 2022 Dec 5;243:114781. doi: 10.1016/j.ejmech.2022.114781. Epub 2022 Sep 19.

Abstract

Suppressors of cytokine signaling 1 (SOCS1) protein, a negative regulator of the Janus kinase (JAK)-signal transducer and activator of transcription (STAT) pathway, possesses a small kinase inhibitory region (KIR) involved in the inhibition of JAK kinases. Several studies showed that mimetics of KIR-SOCS1 can be potent therapeutics in several disorders (e.g., neurological, autoimmune or cardiovascular diseases). In this work, starting from a recently identified cyclic peptidomimetic of KIR-SOCS1, icPS5(Nal1), to optimize the peptide structure and improve its biological activity, we designed novel derivatives, containing crucial amino acids substitutions and/or modifications affecting the ring size. By combining microscale thermophoresis (MST), Circular Dichroism (CD), Nuclear Magnetic Resonance (NMR) and computational studies, we showed that the cycle size plays a key role in the interaction with JAK2 and the substitution of native residues with un-natural building blocks is a valid tool to maintain low-micromolar affinity toward JAK2, greatly increasing their serum stability. These findings contribute to increase the structural knowledge required for the recognition of SOCS1/JAK2 and to progress towards their conversion into more drug-like compounds.

摘要

细胞因子信号转导抑制因子 1(SOCS1)蛋白是 Janus 激酶(JAK)-信号转导子和转录激活子(STAT)途径的负调节剂,它具有一个小的激酶抑制区(KIR),参与 JAK 激酶的抑制。多项研究表明,KIR-SOCS1 的类似物在多种疾病(如神经、自身免疫或心血管疾病)中具有强大的治疗作用。在这项工作中,我们从最近鉴定的 KIR-SOCS1 的环状肽模拟物 icPS5(Nal1)开始,优化肽结构并提高其生物活性,设计了新型衍生物,包含关键氨基酸取代和/或修饰,影响环大小。通过结合微量热泳动(MST)、圆二色性(CD)、核磁共振(NMR)和计算研究,我们表明环大小在与 JAK2 的相互作用中起着关键作用,用非天然构建块取代天然残基是维持对 JAK2 的低微摩尔亲和力的有效工具,极大地提高了它们的血清稳定性。这些发现有助于增加对 SOCS1/JAK2 识别所需的结构知识,并朝着将其转化为更具类药性的化合物的方向前进。

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