Liu Yang, Shang Guohui, Zhang Xuran, Liu Fuyong, Zhang Chi, Li Zhihao, Jia Jing, Xu Yan, Zhang Zhaojing, Yang Shangdong, Zhou Baixue, Luan Yingying, Huang Yanyang, Peng Yue, Han Tianyi, He Ying, Zheng Hong
Department of Medical Genetics and Cell Biology, School of Basic Medical Sciences, Zhengzhou University, Zhengzhou, China.
Department of Clinical Laboratory, The First Affiliated Hospital of Henan University of CM, Henan University of CM, Zhengzhou, China.
Front Cell Neurosci. 2022 Sep 9;16:868291. doi: 10.3389/fncel.2022.868291. eCollection 2022.
Epigenetic modulations lead to changes in gene expression, including DNA methylation, histone modifications, and noncoding RNAs. In recent years, epigenetic modifications have been related to the pathogenesis of different types of cancer, cardiovascular disease, and other diseases. Emerging evidence indicates that DNA methylation could be associated with ischemic stroke (IS) and plays a role in pathological progression, but the underlying mechanism has not yet been fully understood. In this study, we used human methylation 850K BeadChip to analyze the differences in gene methylation status in the peripheral blood samples from two groups (3 IS patients vs. 3 healthy controls). According to their bioinformatics profiling, we found 278 genes with significantly different methylation levels. Seven genes with the most significant methylation modifications were validated in two expanded groups (100 IS patients vs. 100 healthy controls). The gene had significantly different methylation changes in patients compared to the controls. To understand the CAMTA1 function in stroke, we generated knockout in SH-SY5Y cells. RNA seq results in knockout cells revealed the pathways and gene set enrichments involved in cellular proliferation and cell cycle. Furthermore, a series of experiments demonstrated that in the oxygen-glucose deprivation/re-oxygenation (OGD/R) model system, the expression of cyclin D1, an essential regulator of cell cycle progression, was increased in SH-SY5Y KO cells. Increasing evidence demonstrated that ischemic stress could inappropriately raise cyclin D1 levels in mature neurons. However, the molecular signals leading to an increased cyclin D1 level are unclear. Our findings demonstrate for the first time that the gene could regulate cyclin D1 expression and implicate their role in strokes.
表观遗传调控导致基因表达的变化,包括DNA甲基化、组蛋白修饰和非编码RNA。近年来,表观遗传修饰与不同类型癌症、心血管疾病及其他疾病的发病机制相关。新出现的证据表明,DNA甲基化可能与缺血性中风(IS)有关,并在病理进展中起作用,但其潜在机制尚未完全明确。在本研究中,我们使用人类甲基化850K芯片分析两组(3例IS患者与3例健康对照)外周血样本中基因甲基化状态的差异。根据生物信息学分析,我们发现278个基因的甲基化水平存在显著差异。在两个扩大队列(100例IS患者与100例健康对照)中验证了7个甲基化修饰最显著的基因。与对照组相比,该基因在患者中具有显著不同的甲基化变化。为了解CAMTA1在中风中的功能,我们在SH-SY5Y细胞中构建了基因敲除模型。基因敲除细胞中的RNA测序结果揭示了参与细胞增殖和细胞周期的信号通路和基因集富集情况。此外,一系列实验表明,在氧糖剥夺/复氧(OGD/R)模型系统中,细胞周期进程的关键调节因子细胞周期蛋白D1在SH-SY5Y基因敲除细胞中的表达增加。越来越多的证据表明,缺血应激可异常升高成熟神经元中细胞周期蛋白D1的水平。然而,导致细胞周期蛋白D1水平升高的分子信号尚不清楚。我们的研究首次证明该基因可调节细胞周期蛋白D1的表达,并揭示了它们在中风中的作用。