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元转录组学变化表明,Corexit 9500 成分和北极海水中的原油具有共同的生物降解途径。

Metatranscriptomic shifts suggest shared biodegradation pathways for Corexit 9500 components and crude oil in Arctic seawater.

机构信息

Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, Alaska, USA.

Department of Chemistry & Biochemistry, University of Alaska Fairbanks, Fairbanks, Alaska, USA.

出版信息

Environ Microbiol Rep. 2023 Feb;15(1):51-59. doi: 10.1111/1758-2229.13127. Epub 2022 Sep 29.

Abstract

While the genes and pathways responsible for petroleum biodegradation in marine environments have received substantial attention, considerably less is known about those active in the biodegradation of the commonly applied chemical dispersant Corexit 9500. Yet, their fate in the Arctic marine environment is an increasingly important unknown. To elucidate the genes and pathways active in the biodegradation of oil and dispersants, we performed metatranscriptomic sequencing on microbial communities in Arctic seawater exposed to oil, Corexit, or both for 0, 5, and 30 days in a mesocosm incubation experiment. While oil and Corexit stimulated significantly different metatranscriptomic profiles overall, both enriched a suite of fatty acid degradation gene transcripts. Based on the gene transcripts observed and the chemical structures of Corexit 9500 surfactant components, we propose a hypothetical pathway for Corexit surfactant biodegradation in which surfactant ester groups are transformed into fatty acids that are then funnelled into the β-oxidation fatty acid degradation pathway. Several microbial taxa within Oceanospirillales, Pseudomonadales, and Alteromonadales were associated with either oil-only or Corexit-only exposure, potentially implicating them in the degradation of these mixtures. Metabolic gene transcripts were associated with diverse gammaproteobacterial lineages, with many genera exhibiting functional redundancy. These findings offer new insight into the potential genes, pathways, and microbial consortia involved in the biodegradation of Corexit 9500 in the Arctic marine environment.

摘要

虽然海洋环境中石油生物降解的基因和途径已经受到了广泛关注,但对于在北极海洋环境中普遍应用的化学分散剂 Corexit 9500 的生物降解中起作用的基因和途径知之甚少。然而,它们在北极海洋环境中的命运是一个日益重要的未知数。为了阐明在石油和分散剂生物降解中起作用的基因和途径,我们对在中观培养实验中暴露于石油、Corexit 或两者 0、5 和 30 天的北极海水微生物群落进行了宏转录组测序。虽然石油和 Corexit 总体上刺激了非常不同的宏转录组谱,但两者都富集了一系列脂肪酸降解基因转录本。根据观察到的基因转录本和 Corexit 9500 表面活性剂成分的化学结构,我们提出了一种 Corexit 表面活性剂生物降解的假设途径,其中表面活性剂酯基转化为脂肪酸,然后被导入β-氧化脂肪酸降解途径。海洋螺旋菌目、假单胞菌目和交替单胞菌目中的几个微生物类群与仅石油或仅 Corexit 暴露有关,可能暗示它们参与了这些混合物的降解。代谢基因转录本与多种γ变形杆菌系相关,许多属表现出功能冗余。这些发现为北极海洋环境中 Corexit 9500 生物降解涉及的潜在基因、途径和微生物群落提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f4c/10103760/d7423a8970bd/EMI4-15-51-g004.jpg

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