Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
Acc Chem Res. 2022 Oct 18;55(20):2998-3009. doi: 10.1021/acs.accounts.2c00420. Epub 2022 Sep 30.
The polymerization of biomolecules is a central operation in biology that connects molecular signals with proliferative and information-rich events in cells. As molecules arrange precisely across 3-D space, they create new functional capabilities such as catalysis and transport highways and exhibit new phase separation phenomena that fuel nonequilibrium dynamics in cells. Hence, the observed polymer chemistry manifests itself as a molecular basis leading to cellular phenotypes, expressed as a multitude of hierarchical structures found in cell biology. Although many milestone discoveries had accompanied the rise of the synthetic polymer era, fundamental studies were realized within a closed, pristine environment and that their behavior in a complex multicomponent system remains challenging and thus unexplored. From this perspective, there is a rich trove of undiscovered knowledge that awaits the polymer science community that can revolutionize understanding in the interactive nanoscale world of the living cell.In this Account, we discuss the strategies that have enabled synthetic polymer chemistry to be conducted within the cells (membrane inclusive) and to establish monomer design principles that offer spatiotemporal control of the polymerization. As reaction considerations such as monomer concentration, polymer growth dynamics, and reactivities are intertwined with the subcellular environment and transport processes, we first provide a chemical narrative of each major cellular compartment. The conditions within each compartment will therefore set the boundaries on the type of polymer chemistry that can be conducted. Both covalent and supramolecular polymerization concepts are explored separately in the context of scaffold design, polymerization mechanism, and activation. To facilitate transport into a localized subcellular space, we show that monomers can be reversibly modified by targeting groups or stimulus-responsive motifs that react within the specific compartment. Upon polymerization, we discuss the characterization of the resultant polymeric structures and how these phase-separated structures would impact biological processes such as cell cycle, metabolism, and apoptosis. As we begin to integrate cellular biochemistry with in situ polymer science, we identify landmark challenges and technological hurdles that, when overcome, would lead to invaluable discoveries in macromolecular therapeutics and biology.
生物分子的聚合是生物学中的核心操作,它将分子信号与细胞中的增殖和信息丰富事件联系起来。当分子在 3D 空间中精确排列时,它们会产生新的功能,如催化和运输高速公路,并表现出新的相分离现象,为细胞中的非平衡动力学提供燃料。因此,观察到的聚合物化学表现为导致细胞表型的分子基础,表现在细胞生物学中发现的多种层次结构中。虽然许多里程碑式的发现伴随着合成聚合物时代的兴起,但基础研究是在封闭、原始的环境中进行的,它们在复杂的多组分系统中的行为仍然具有挑战性,因此尚未得到探索。从这个角度来看,聚合物科学领域有丰富的未被发现的知识等待着被发现,这些知识可以彻底改变我们对活细胞中相互作用的纳米世界的理解。
在本述评中,我们讨论了使合成聚合物化学能够在细胞内(包括膜内)进行的策略,并建立了单体设计原则,这些原则提供了聚合的时空控制。由于反应考虑因素(如单体浓度、聚合物生长动力学和反应性)与亚细胞环境和运输过程交织在一起,我们首先提供了每个主要细胞区室的化学叙述。因此,每个区室的条件将决定可以进行的聚合物化学类型。共价和超分子聚合概念分别在支架设计、聚合机制和激活方面进行了探讨。为了促进进入局部亚细胞空间的运输,我们表明单体可以通过靶向基团或刺激响应的基序可逆修饰,这些基团或基序在特定的隔室中反应。聚合后,我们讨论了所得聚合物结构的表征以及这些相分离结构如何影响细胞周期、代谢和细胞凋亡等生物学过程。当我们开始将细胞生物化学与原位聚合物科学相结合时,我们确定了具有里程碑意义的挑战和技术障碍,如果克服这些挑战和障碍,将在大分子治疗学和生物学方面带来宝贵的发现。