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来自物种复合体(象甲科:小蠹亚科)菌圃的代谢条形码揭示了多样且功能冗余的真菌组合。

Metabarcoding of mycetangia from the species complex (Curculionidae: Scolytinae) reveals diverse and functionally redundant fungal assemblages.

作者信息

Vazquez-Ortiz Karina, Pineda-Mendoza Rosa María, González-Escobedo Román, Davis Thomas S, Salazar Kevin F, Rivera-Orduña Flor N, Zúñiga Gerardo

机构信息

Laboratorio de Variación Biológica y Evolución, Departamento de Zoología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, Mexico.

Laboratorio de Microbiología, Facultad de Zootecnia y Ecología, Universidad Autónoma de Chihuahua, Chihuahua, Mexico.

出版信息

Front Microbiol. 2022 Sep 16;13:969230. doi: 10.3389/fmicb.2022.969230. eCollection 2022.

Abstract

-bark beetles are associated with microbes that can detoxify terpenes, degrade complex molecules, supplement and recycle nutrients, fix nitrogen, produce semiochemicals, and regulate ecological interactions between microbes. Females of some species harbor microbes in specialized organs called mycetangia; yet little is known about the microbial diversity contained in these structures. Here, we use metabarcoding to characterize mycetangial fungi from beetle species in the complex, and analyze variation in biodiversity of microbial assemblages between beetle species. Overall fungal diversity was represented by 4 phyla, 13 classes, 25 orders, 39 families, and 48 genera, including 33 filamentous fungi, and 15 yeasts. The most abundant genera were , , , , , , , , , and . Analysis of α-diversity indicated that fungal assemblages of . showed the highest richness and diversity, whereas those associated with . and . had the lowest richness and diversity, respectively. Analysis of β-diversity showed clear differentiation in the assemblages associated with . , . , and . , but not between closely related species, including . and . and . and . . A core mycobiome was not statistically identified; however, the genus was shared among seven beetle species. Interpretation of a tanglegram suggests evolutionary congruence between fungal assemblages and species of the . complex. The presence of different amplicon sequence variants (ASVs) of the same genus in assemblages from species of the . complex outlines the complexity of molecular networks, with the most complex assemblages identified from . , . , . , and . . Analysis of functional variation of fungal assemblages indicated multiple trophic groupings, symbiotroph/saprotroph guilds represented with the highest frequency (∼31% of identified genera). These findings improve our knowledge about the diversity of mycetangial communities in species of the . complex and suggest that minimal apparently specific assemblages are maintained and regulated within mycetangia.

摘要

树皮甲虫与能够使萜类化合物解毒、降解复杂分子、补充和循环养分、固氮、产生信息素以及调节微生物之间生态相互作用的微生物相关联。一些物种的雌性个体在称为菌胞体的特殊器官中容纳微生物;然而,对于这些结构中所含的微生物多样性知之甚少。在这里,我们使用宏条形码技术来表征该复合体中甲虫物种的菌胞体真菌,并分析甲虫物种之间微生物群落生物多样性的变化。总体真菌多样性由4个门、13个纲、25个目、39个科和48个属代表,包括33种丝状真菌和15种酵母。最丰富的属是、、、、、、、、、和。α多样性分析表明,的真菌群落显示出最高的丰富度和多样性,而与和相关的群落分别具有最低的丰富度和多样性。β多样性分析表明,与、和相关的群落存在明显差异,但在亲缘关系密切的物种之间没有差异,包括和以及和。未通过统计学方法鉴定出核心真菌群落;然而,属在七个甲虫物种中都有。对纠缠图的解释表明真菌群落与复合体物种之间存在进化一致性。复合体物种的群落中同一属的不同扩增子序列变体(ASV)的存在勾勒出分子网络的复杂性,其中从、、和中鉴定出的群落最为复杂。真菌群落功能变异分析表明存在多个营养分组,共生营养/腐生营养 guilds的出现频率最高(约占已鉴定属的31%)。这些发现增进了我们对复合体物种菌胞体群落多样性的了解,并表明在菌胞体内维持和调节着最少的明显特定群落。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef8c/9524821/5aceeeb29bb3/fmicb-13-969230-g001.jpg

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