• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

SARS-CoV-2 病毒载量分布与患者年龄的因果、贝叶斯和非参数建模。

Causal, Bayesian, & non-parametric modeling of the SARS-CoV-2 viral load distribution vs. patient's age.

机构信息

Max Planck Institute for Astrophysics, Garching, Germany.

Fakultät für Physik, Ludwig-Maximilians-Universität München, Munich, Germany.

出版信息

PLoS One. 2022 Oct 5;17(10):e0275011. doi: 10.1371/journal.pone.0275011. eCollection 2022.

DOI:10.1371/journal.pone.0275011
PMID:36197849
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9534394/
Abstract

The viral load of patients infected with SARS-CoV-2 varies on logarithmic scales and possibly with age. Controversial claims have been made in the literature regarding whether the viral load distribution actually depends on the age of the patients. Such a dependence would have implications for the COVID-19 spreading mechanism, the age-dependent immune system reaction, and thus for policymaking. We hereby develop a method to analyze viral-load distribution data as a function of the patients' age within a flexible, non-parametric, hierarchical, Bayesian, and causal model. The causal nature of the developed reconstruction additionally allows to test for bias in the data. This could be due to, e.g., bias in patient-testing and data collection or systematic errors in the measurement of the viral load. We perform these tests by calculating the Bayesian evidence for each implied possible causal direction. The possibility of testing for bias in data collection and identifying causal directions can be very useful in other contexts as well. For this reason we make our model freely available. When applied to publicly available age and SARS-CoV-2 viral load data, we find a statistically significant increase in the viral load with age, but only for one of the two analyzed datasets. If we consider this dataset, and based on the current understanding of viral load's impact on patients' infectivity, we expect a non-negligible difference in the infectivity of different age groups. This difference is nonetheless too small to justify considering any age group as noninfectious.

摘要

感染 SARS-CoV-2 的患者的病毒载量在对数尺度上有所不同,并且可能与年龄有关。文献中存在争议,即病毒载量分布是否实际上取决于患者的年龄。这种依赖性将对 COVID-19 的传播机制、年龄相关的免疫系统反应以及因此对决策产生影响。我们在此开发了一种方法,以便在灵活、非参数、分层、贝叶斯和因果模型中,根据患者的年龄分析病毒载量分布数据。所开发的重建的因果性质还允许测试数据中的偏差。这可能是由于例如患者检测和数据收集的偏差,或者病毒载量测量中的系统误差。我们通过计算每个隐含可能因果方向的贝叶斯证据来执行这些测试。在数据收集和识别因果方向方面进行偏差测试的可能性在其他情况下也非常有用。出于这个原因,我们免费提供我们的模型。当应用于公开的年龄和 SARS-CoV-2 病毒载量数据时,我们发现病毒载量随年龄呈统计学显著增加,但仅在分析的两个数据集之一中如此。如果我们考虑这个数据集,并且基于对病毒载量对患者传染性的当前理解,我们预计不同年龄组之间的传染性会有显著差异。然而,这种差异太小,不足以认为任何年龄组都没有传染性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/309ca8278b8a/pone.0275011.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/43bbf06cd805/pone.0275011.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/b556b2028513/pone.0275011.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/3c9d4dfadc34/pone.0275011.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/c40e21066d83/pone.0275011.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/19cb96f6c61b/pone.0275011.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/fbfafe4bcb71/pone.0275011.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/309ca8278b8a/pone.0275011.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/43bbf06cd805/pone.0275011.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/b556b2028513/pone.0275011.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/3c9d4dfadc34/pone.0275011.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/c40e21066d83/pone.0275011.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/19cb96f6c61b/pone.0275011.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/fbfafe4bcb71/pone.0275011.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62cf/9534394/309ca8278b8a/pone.0275011.g007.jpg

相似文献

1
Causal, Bayesian, & non-parametric modeling of the SARS-CoV-2 viral load distribution vs. patient's age.SARS-CoV-2 病毒载量分布与患者年龄的因果、贝叶斯和非参数建模。
PLoS One. 2022 Oct 5;17(10):e0275011. doi: 10.1371/journal.pone.0275011. eCollection 2022.
2
SARS-CoV-2 viral-load distribution reveals that viral loads increase with age: a retrospective cross-sectional cohort study.SARS-CoV-2 病毒载量分布显示病毒载量随年龄增长而增加:一项回顾性横断面队列研究。
Int J Epidemiol. 2022 Jan 6;50(6):1795-1803. doi: 10.1093/ije/dyab145. Epub 2021 Sep 8.
3
Rapid, point-of-care antigen tests for diagnosis of SARS-CoV-2 infection.用于 SARS-CoV-2 感染诊断的快速、即时抗原检测。
Cochrane Database Syst Rev. 2022 Jul 22;7(7):CD013705. doi: 10.1002/14651858.CD013705.pub3.
4
Temporal profiles of viral load in posterior oropharyngeal saliva samples and serum antibody responses during infection by SARS-CoV-2: an observational cohort study.SARS-CoV-2 感染后口咽后唾液样本和血清抗体反应中的病毒载量时间特征:一项观察性队列研究。
Lancet Infect Dis. 2020 May;20(5):565-574. doi: 10.1016/S1473-3099(20)30196-1. Epub 2020 Mar 23.
5
SARS-CoV-2 transmitters have more than three times higher viral loads than non-transmitters - Practical use of viral load for disease control.SARS-CoV-2 传播者的病毒载量比非传播者高三倍以上——病毒载量在疾病控制中的实际应用。
J Clin Virol. 2022 Jun;150-151:105131. doi: 10.1016/j.jcv.2022.105131. Epub 2022 Mar 14.
6
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infectivity by Viral Load, S Gene Variants and Demographic Factors, and the Utility of Lateral Flow Devices to Prevent Transmission.严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)的病毒载量、S 基因变异和人口统计学因素的传染性,以及侧向流动设备在预防传播方面的效用。
Clin Infect Dis. 2022 Feb 11;74(3):407-415. doi: 10.1093/cid/ciab421.
7
A joint Bayesian hierarchical model for estimating SARS-CoV-2 genomic and subgenomic RNA viral dynamics and seroconversion.一种用于估计严重急性呼吸综合征冠状病毒2(SARS-CoV-2)基因组和亚基因组RNA病毒动力学及血清转化的联合贝叶斯层次模型。
Biostatistics. 2024 Apr 15;25(2):336-353. doi: 10.1093/biostatistics/kxad016.
8
Association of Demographic, Clinical, and Vaccination Characteristics with COVID-19 Viral Load Assessed by qRT-PCR.通过定量逆转录聚合酶链反应评估的人口统计学、临床和疫苗接种特征与新冠病毒载量的关联
Arch Iran Med. 2023 Dec 1;26(12):688-694. doi: 10.34172/aim.2023.101.
9
Sars-Cov-2 antigen tests predict infectivity based on viral culture: comparison of antigen, PCR viral load, and viral culture testing on a large sample cohort.Sars-Cov-2 抗原检测基于病毒培养预测传染性:对大样本队列的抗原、PCR 病毒载量和病毒培养检测的比较。
Clin Microbiol Infect. 2023 Jan;29(1):94-100. doi: 10.1016/j.cmi.2022.07.010. Epub 2022 Jul 19.
10
A Flexible Regression Modeling Approach Applied to Observational Laboratory Virological Data Suggests That SARS-CoV-2 Load in Upper Respiratory Tract Samples Changes with COVID-19 Epidemiology.一种应用于观察性实验室病毒学数据的灵活回归建模方法表明,上呼吸道样本中的 SARS-CoV-2 载量随 COVID-19 流行病学而变化。
Viruses. 2023 Sep 23;15(10):1988. doi: 10.3390/v15101988.

引用本文的文献

1
Probabilistic Autoencoder Using Fisher Information.使用费希尔信息的概率自动编码器。
Entropy (Basel). 2021 Dec 6;23(12):1640. doi: 10.3390/e23121640.

本文引用的文献

1
SARS-CoV-2 viral-load distribution reveals that viral loads increase with age: a retrospective cross-sectional cohort study.SARS-CoV-2 病毒载量分布显示病毒载量随年龄增长而增加:一项回顾性横断面队列研究。
Int J Epidemiol. 2022 Jan 6;50(6):1795-1803. doi: 10.1093/ije/dyab145. Epub 2021 Sep 8.
2
Children Have Similar Reverse Transcription Polymerase Chain Reaction Cycle Threshold for Severe Acute Respiratory Syndrome Coronavirus 2 in Comparison With Adults.儿童与成人相比,严重急性呼吸综合征冠状病毒 2 的逆转录聚合酶链反应循环阈值相似。
Pediatr Infect Dis J. 2021 Nov 1;40(11):e413-e417. doi: 10.1097/INF.0000000000003300.
3
Upper respiratory tract SARS-CoV-2 RNA loads in symptomatic and asymptomatic children and adults.
上呼吸道 SARS-CoV-2 RNA 载量在有症状和无症状儿童和成人中的变化。
Clin Microbiol Infect. 2021 Dec;27(12):1858.e1-1858.e7. doi: 10.1016/j.cmi.2021.08.001. Epub 2021 Aug 9.
4
Bayesian back-calculation and nowcasting for line list data during the COVID-19 pandemic.贝叶斯反推和实时预测在 COVID-19 大流行期间的列表数据。
PLoS Comput Biol. 2021 Jul 12;17(7):e1009210. doi: 10.1371/journal.pcbi.1009210. eCollection 2021 Jul.
5
Lower nasopharyngeal viral loads in pediatric population. The missing piece to understand SARS-CoV-2 infection in children?儿童鼻咽部病毒载量较低。这是理解儿童 SARS-CoV-2 感染的缺失环节吗?
J Infect. 2021 Aug;83(2):e18-e19. doi: 10.1016/j.jinf.2021.06.009. Epub 2021 Jun 13.
6
Comparison of Symptoms and RNA Levels in Children and Adults With SARS-CoV-2 Infection in the Community Setting.社区环境中儿童和成人 SARS-CoV-2 感染的症状和 RNA 水平比较。
JAMA Pediatr. 2021 Oct 1;175(10):e212025. doi: 10.1001/jamapediatrics.2021.2025. Epub 2021 Oct 4.
7
Estimating infectiousness throughout SARS-CoV-2 infection course.估算 SARS-CoV-2 感染全程的传染性。
Science. 2021 Jul 9;373(6551). doi: 10.1126/science.abi5273. Epub 2021 May 25.
8
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Viral Load Kinetics in Symptomatic Children, Adolescents, and Adults.严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)在有症状的儿童、青少年和成人中的病毒载量动力学。
Clin Infect Dis. 2021 Sep 15;73(6):e1384-e1386. doi: 10.1093/cid/ciab396.
9
Infectivity of severe acute respiratory syndrome coronavirus 2 in children compared with adults.儿童与成人相比严重急性呼吸综合征冠状病毒 2 的传染性。
CMAJ. 2021 Apr 26;193(17):E601-E606. doi: 10.1503/cmaj.210263. Epub 2021 Apr 9.
10
Analysis of cycle threshold values in SARS-CoV-2-PCR in a long-term study.对 SARS-CoV-2-PCR 中循环阈值在长期研究中的分析。
J Clin Virol. 2021 May;138:104791. doi: 10.1016/j.jcv.2021.104791. Epub 2021 Mar 10.