IEEE Trans Nanobioscience. 2023 Jul;22(3):467-479. doi: 10.1109/TNB.2022.3212625. Epub 2023 Jun 29.
Microfluidic capture chips are useful for preparing or analyzing a wide range of different chemical, biological, and medical samples. A typical microfluidic capture chip contains features that capture certain targets (i.e. molecules, particles, cells) as they flow through the chip. However, creating optimal capture chip designs is difficult because of the inherent relationship between capture efficiency and flow resistance: as more capture features are added to the chip, the capture efficiency increases, but the additional features slow the flow of fluid through the chip. This paper introduces the use of multi-objective optimization to generate capture chip designs that balance the trade-off between maximizing target capture efficiency and minimizing resistance to fluid flow. Design automation for this important class of microfluidic chips has not been attempted previously. Our approach automatically produces a Pareto front of non-dominated chip designs in a reasonable amount of time, and most of these designs have comparable capture efficiency to hand-designed chips with far lower flow resistance. By choosing from the chip designs on the Pareto front, a user can obtain high capture efficiency without exceeding the flow resistance constraints of their application.
微流控捕获芯片在制备和分析各种化学、生物和医学样本方面非常有用。一个典型的微流控捕获芯片包含一些特征,可以在它们流经芯片时捕获某些目标(即分子、颗粒、细胞)。然而,由于捕获效率和流动阻力之间的固有关系,创建最佳的捕获芯片设计是困难的:随着芯片上添加的捕获特征越多,捕获效率就会提高,但这些额外的特征会减缓流体在芯片中的流动。本文介绍了使用多目标优化来生成捕获芯片设计,以平衡最大化目标捕获效率和最小化流体流动阻力之间的权衡。以前从未尝试过对这一类重要的微流控芯片进行设计自动化。我们的方法可以在合理的时间内自动生成非支配芯片设计的 Pareto 前沿,并且这些设计中的大多数都具有与流动阻力低得多的手工设计芯片相当的捕获效率。通过从 Pareto 前沿上的芯片设计中进行选择,用户可以在不超过应用的流动阻力限制的情况下获得高捕获效率。