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小儿肾上腺皮质癌潜在核心基因和微小RNA的鉴定:生物信息学分析

Identification of potential core genes and miRNAs in pediatric ACC bioinformatics analysis.

作者信息

Fang Chunyan, Ye Yulong, Wang Fangyue, Shen Yifeng, You Yaodong

机构信息

TCM Regulating Metabolic Diseases Key Laboratory of Sichuan Province, Hospital of Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.

Tea Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.

出版信息

Intractable Rare Dis Res. 2022 Aug;11(3):133-142. doi: 10.5582/irdr.2022.01077.

DOI:10.5582/irdr.2022.01077
PMID:36200027
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9437998/
Abstract

Pediatric adrenocortical carcinomas (ACC) are rare aggressive neoplasms with heterogeneous prognosis, and often produce a most lethal malignant tumor, whereas its aetiology is still unclear. The aim of the present study was to identify the factors responsible for the development of pediatric ACC, a better understanding of the disease, and investigate new molecular biomarkers and therapeutic targets. To identify the key genes and miRNAs linked to pediatric ACC, as well as their potential molecular mechanisms, the GSEGSE75415 and GSE169253 microarray datasets were analyzed. A total of 329 differentially produced genes (DEGs) and 187 differentially produced miRNAs (DEMs) were obtained after analyzing the GSEGSE75415 and GSE169253 datasets, respectively. Next, 3,359 genes were obtained by overlapping the target mRNAs of DEMs. Following protein-protein interaction network and Gene Ontology analysis, the ten nodes with the highest degrees were screened as hub genes. Among them, the highly expressed hub genes, and , were associated with a worse overall survival. Additionally, hsa-miR-376, hsa-miR-148, hsa-miR-139, and hsa-miR-1305 were strongly associated with poorer survival. We proposed that the hub genes (, , hsa-miR-376, hsa-miR-148, hsa-miR-139, and hsa-miR-1305) may have a definite impact on cellular proliferation and migration in adrenocortical tumors. The roles of these hub genes in adrenocortical tumors may provide novel insight to improve the diagnosis and treatment of patients with pediatric ACC.

摘要

小儿肾上腺皮质癌(ACC)是一种罕见的侵袭性肿瘤,预后各异,常产生极具致死性的恶性肿瘤,但其病因仍不清楚。本研究的目的是确定导致小儿ACC发生的因素,更好地了解该疾病,并研究新的分子生物标志物和治疗靶点。为了确定与小儿ACC相关的关键基因和miRNA及其潜在的分子机制,对GSEGSE75415和GSE169253基因芯片数据集进行了分析。分别分析GSEGSE75415和GSE169253数据集后,共获得329个差异表达基因(DEG)和187个差异表达miRNA(DEM)。接下来,通过重叠DEM的靶mRNA获得3359个基因。经过蛋白质-蛋白质相互作用网络和基因本体分析,筛选出度最高的10个节点作为枢纽基因。其中,高表达的枢纽基因 和 与较差的总生存期相关。此外,hsa-miR-376、hsa-miR-148、hsa-miR-139和hsa-miR-1305与较差的生存率密切相关。我们提出,枢纽基因( 、 、hsa-miR-376、hsa-miR-148、hsa-miR-139和hsa-miR-1305)可能对肾上腺皮质肿瘤的细胞增殖和迁移有一定影响。这些枢纽基因在肾上腺皮质肿瘤中的作用可能为改善小儿ACC患者的诊断和治疗提供新的见解。