Institute of Molecular Biomedicine, Faculty of Medicine, Comenius University, Sasinkova 4, 811 08, Bratislava, Slovakia.
Department of Paediatrics, Faculty of Medicine, National Institute of Children's Diseases, Comenius University in Bratislava, Bratislava, Slovakia.
Sci Rep. 2022 Oct 7;12(1):16812. doi: 10.1038/s41598-022-21248-7.
Extracellular DNA (ecDNA) in plasma is a non-specific biomarker of tissue damage. Urinary ecDNA, especially of mitochondrial origin, is a potential non-invasive biomarker of kidney damage. Despite prominent tissue damage, ecDNA has not yet been comprehensively analysed in acute kidney injury (AKI). We analysed different fractions of ecDNA, i.e. total, nuclear and mitochondrial, in plasma and urine of children, and different animal models of AKI. We also analysed the activity of the deoxyribonuclease (DNase), which is contributes to the degradation of ecDNA. Patients with AKI had higher total and nuclear ecDNA in both, plasma and urine (sixfold and 12-fold in plasma, and 800-fold in urine, respectively), with no difference in mitochondrial ecDNA. This was mainly found for patients with AKI due to tubulointerstitial nephritis and atypical haemolytic uremic syndrome. Increased plasma ecDNA was also found in animal models of AKI, including adenine nephropathy (fivefold), haemolytic uremic syndrome (fourfold), and ischemia-reperfusion injury (1.5-fold). Total urinary ecDNA was higher in adenine nephropathy and ischemia-reperfusion injury (1300-fold and twofold, respectively). DNase activity in urine was significantly lower in all animal models of AKI in comparison to controls. In conclusion, plasma total and nuclear ecDNA and urinary total ecDNA is increased in patients and animals with particular entities of AKI, suggesting a mechanism-dependent release of ecDNA during AKI. Further studies should focus on the dynamics of ecDNA and its potential role in the pathogenesis of AKI.
细胞外 DNA(ecDNA)在血浆中是组织损伤的非特异性生物标志物。尿 ecDNA,特别是线粒体来源的 ecDNA,是潜在的非侵入性肾损伤生物标志物。尽管组织损伤明显,但 ecDNA 在急性肾损伤(AKI)中尚未得到全面分析。我们分析了儿童和不同 AKI 动物模型血浆和尿液中不同 ecDNA 片段,即总、核和线粒体 ecDNA。我们还分析了脱氧核糖核酸酶(DNase)的活性,DNase 有助于 ecDNA 的降解。AKI 患者的血浆和尿液中总 ecDNA 和核 ecDNA 水平均升高(血浆中分别升高六倍和 12 倍,尿液中升高 800 倍),而线粒体 ecDNA 水平没有差异。这主要见于肾小管间质性肾炎和非典型溶血尿毒综合征所致 AKI 患者。AKI 动物模型中也发现血浆 ecDNA 增加,包括腺嘌呤肾病(五倍)、溶血尿毒综合征(四倍)和缺血再灌注损伤(1.5 倍)。腺嘌呤肾病和缺血再灌注损伤时总尿 ecDNA 更高(分别为 1300 倍和两倍)。与对照组相比,所有 AKI 动物模型的尿液中 DNase 活性均显著降低。总之,AKI 患者和动物的血浆总 ecDNA 和核 ecDNA 以及尿总 ecDNA 增加,提示 AKI 期间 ecDNA 释放具有机制依赖性。进一步的研究应集中在 ecDNA 的动态及其在 AKI 发病机制中的潜在作用。