Center for anatomical, pathological, and forensic medical researches, Graduate School of Medicine, Kyoto University, Kyoto, 606-8501, Japan.
Drug and Discovery Medicine, Graduate School of Medicine, Medical Innovation Center, Kyoto University, Kyoto, 606-8507, Japan.
Sci Rep. 2022 Oct 10;12(1):16950. doi: 10.1038/s41598-022-20663-0.
Many studies have been performed to quantify cell signaling. Cell signaling molecules are phosphorylated in response to extracellular stimuli, with the phosphorylation sequence forming a signal cascade. The information gain during a signal event is given by the logarithm of the phosphorylation molecule ratio. The average information gain can be regarded as the signal transduction quantity (ST), which is identical to the Kullback-Leibler divergence (KLD), a relative entropy. We previously reported that if the total ST value in a given signal cascade is maximized, the ST rate (STR) of each signaling molecule per signal duration (min) approaches a constant value. To experimentally verify this theoretical conclusion, we measured the STR of the epidermal growth factor (EGF)-related cascade in A431 skin cancer cells following stimulation with EGF using antibody microarrays against phosphorylated signal molecules. The results were consistent with those from the theoretical analysis. Thus, signaling transduction systems may adopt a strategy that prioritizes the maximization of ST. Furthermore, signal molecules with similar STRs may form a signal cascade. In conclusion, ST and STR are promising properties for quantitative analysis of signal transduction.
许多研究已经被执行来量化细胞信号。细胞信号分子在响应细胞外刺激时被磷酸化,磷酸化的顺序形成信号级联。信号事件中的信息增益由磷酸化分子比的对数给出。平均信息增益可以被看作是信号转导量(ST),它与克劳修斯-勒贝格散度(KLD),一种相对熵,相同。我们之前报道过,如果在给定的信号级联中总 ST 值最大化,那么每个信号持续时间(分钟)的每个信号分子的 ST 率(STR)接近一个恒定值。为了实验验证这一理论结论,我们使用针对磷酸化信号分子的抗体微阵列测量了表皮生长因子(EGF)刺激 A431 皮肤癌细胞中的 EGF 相关级联的 STR。结果与理论分析一致。因此,信号转导系统可能采用一种优先最大化 ST 的策略。此外,具有相似 STR 的信号分子可能形成信号级联。总之,ST 和 STR 是信号转导定量分析的有前途的性质。