Coordinate accumulation of homeologous transcripts of seven cotton Lea gene families during embryogenesis and germination.

One of two related patterns of total transcript accumulation are seen during embryogenesis for 18 cotton Lea (Late embryogenesis-abundant) gene families in the allotetraploid cotton Gossypium hirsutum L. cv Coker 201. Coordinate accumulation in each class is complex, suggesting that Lea mRNA abundance is regulated by several events. Each of the Lea gene families probably contains two active homeologous genes (alloalleles), one in each of cotton's two subgenomes. It is of interest whether both transcripts of a Lea family are regulated the same or whether the complexity of total transcript accumulation is due to different regulation of the two transcripts. The two polypeptides encoded by the homeologous transcripts of 7 Lea families can be distinguished on two-dimensional gels. The majority of Lea transcripts in total RNAs is shown to be functional in vitro throughout development; thus in vitro translation should faithfully measure their relative abundance. The ratio of the two transcripts of each was followed during embryo maturation when Lea transcript concentration increases an average of 70-fold and during the first 12 hr of germination when Lea transcripts decline in concentration an average of 50-fold. For 6 of the Lea families, the relative level of the two transcripts is invariant throughout this period. The two constituent transcripts of the seventh, Lea9, change 5-fold in relative concentration during late maturation and 3-fold during germination. Both transcripts still follow the same temporal pattern of accumulation; only their rates of change are somewhat different. These Lea families are a random sample of the 18 described. If multiple events affect the mRNA abundance of each Lea family, such events then each affect their individual transcripts in a similar way.